DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment RpL13A and RPL13A

DIOPT Version :9

Sequence 1:	NP_649560.1	Gene:	RpL13A / 40687	FlyBaseID:	FBgn0037351	Length:	205	Species:	Drosophila melanogaster
Sequence 2:	NP_036555.1	Gene:	RPL13A / 23521	HGNCID:	10304	Length:	203	Species:	Homo sapiens

Alignment Length:	196	Identity:	114/196 - (58%)
Similarity:	159/196 - (81%)	Gaps:	0/196 - (0%)

- Green bases have known domain annotations that are detailed below.

  Fly     7 RTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYLRKRCNVNPARG 71
            :.:|:|||||||||||::|||.:|.|.||.|||||.:|:||:|||||:|:||:||||.|.||:||
Human     5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRG 69

  Fly    72 PFHFRAPSRIFYKAVRGMIPHKTKRGQAALARLRVFDGIPSPYDKRRRVVVPIAMRVLTLRSDRK 136
            |:|||||||||::.||||:|||||||||||.||:||||||.||||::|:|||.|::|:.|:..||
Human    70 PYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRK 134

  Fly   137 YCQVGRLSHEVGWHYQDVIKSLERKRKAKLRVTLKHNRELKKLTVKARENIAKAAEPFNKIIKSY 201
            :..:|||:|||||.||.|..:||.|||.|.::..:..::|.:|..:|.:|:.|..:.:.:::|::
Human   135 FAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTH 199

  Fly   202 G 202
            |
Human   200 G 200

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
RpL13A	NP_649560.1	Ribosomal_L13	6..203	CDD:412316	114/196 (58%)
RPL13A	NP_036555.1	PTZ00068	6..200	CDD:240253	113/193 (59%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C165143162
Domainoid	1	1.000	161	1.000	Domainoid score	I4041
eggNOG	1	0.900	-	-		E1_COG0102
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H111053
Inparanoid	1	1.050	254	1.000	Inparanoid score	I3202
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG53755
OrthoDB	1	1.010	-	-		D1312756at2759
OrthoFinder	1	1.000	-	-		FOG0001720
OrthoInspector	1	1.000	-	-		oto88891
orthoMCL	1	0.900	-	-		OOG6_100793
Panther	1	1.100	-	-	LDO	PTHR11545
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1111
SonicParanoid	1	1.000	-	-		X1276
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
User_Submission	0	0.000	Not matched by this tool.
	16	15.800