DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atu and leo-1

DIOPT Version :9

Sequence 1:NP_524240.1 Gene:Atu / 40684 FlyBaseID:FBgn0019637 Length:725 Species:Drosophila melanogaster
Sequence 2:NP_502135.1 Gene:leo-1 / 178052 WormBaseID:WBGene00007110 Length:430 Species:Caenorhabditis elegans


Alignment Length:480 Identity:170/480 - (35%)
Similarity:250/480 - (52%) Gaps:75/480 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 SGSRTSRSRSKTGTPSPNRSRSGSASGSGSDVGVPKKKARKASGSDQEKKK---SGSDSDIEESP 275
            |.|..:...|..|||    .:|.:.|..||....|||:       :..||:   :.||.|.:..|
 Worm     2 SSSEGNSDASAPGTP----VKSSTPSSRGSSPDSPKKQ-------EPSKKRAILNESDDDDDSRP 55

  Fly   276 TKAKKSRLIDTDSDSNQDVG---KKAP-AAADIFGDADDISDDE-DEAGPAARKSPVRSKSRSQS 335
            .   ..:|.|:..|:....|   |.:| |...:|||....|||: |..|     .|..|.:|:: 
 Worm    56 A---PRQLSDSSDDNIHPRGGGEKSSPGAGGGLFGDLSGSSDDDSDREG-----KPKESNTRAR- 111

  Fly   336 KSHSHSRSMSHSRSRSRSRSRDKVESQVESAPKE-DEPEPLPETRIDVEI--PRISADLGKE-QH 396
                    :|.|.:.||....| ::..|.:.|.| ||.|...|...|.|:  .|::.:...: .|
 Worm   112 --------LSDSDAESRGSLND-LQGIVMANPDEIDEDEKAKEHVHDTEMVTGRVTLEYAADPPH 167

  Fly   397 FIKLPNFLSVVTHPFDPETY-EDEIDEEETMDEEGRQRIKLKVSNTIRWREYMNNKGDMVRESNA 460
            |:::||||||.||||||:.| |||.||:..:|:|||.|:||:|.||:|||...:..|..:|||||
 Worm   168 FVRMPNFLSVATHPFDPQHYEEDEDDEQAKLDDEGRTRLKLRVENTLRWRVRKDENGKEIRESNA 232

  Fly   461 RFVRWSDGSMSLHLGNEIFDAYRQPLLGDH-NHLFVRQGTGLQGQSVFRTKLTFRPHSTESFTHK 524
            :.|:|.||:|||:||||||:....||..:: .||:|:|.|.:..|:|...::|||||||:|.||:
 Worm   233 KIVKWDDGTMSLYLGNEIFEVSLVPLNSNNLPHLYVKQPTLMSAQAVLTHRMTFRPHSTDSQTHR 297

  Fly   525 KMTMSLADRSSKTSGIKILTQVGKDPTTDRPTQLREEEAKLR------QAMRNQHKSLPKKKKPG 583
            |:|:::||||.|.:.:|::..||::|...|....|:||..||      |.:||..|         
 Worm   298 KVTLNMADRSRKNAQVKVMDDVGQNPEITRRENARKEEESLRAHIRRTQMVRNNFK--------- 353

  Fly   584 AGEPLIGGGTSSYQHDEGSDDENAISLSAIKNRYKK----GSGAGQAEVKASTIYSSDEDEGSDF 644
                 :.|...:.|:   ||||: :..|:.|.:.|:    |:.:...:..|.|...|..|..||.
 Worm   354 -----VRGPRYAGQY---SDDED-MPTSSRKGKKKEAPIIGASSESEDDHADTTKKSGSDSDSDE 409

  Fly   645 EARRSKKVDKAKASKALRDSDSESD 669
            |.|:.|:..|    |.:..||.|||
 Worm   410 EYRKRKQQQK----KQIVTSDEESD 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtuNP_524240.1 Leo1 396..550 CDD:281933 81/155 (52%)
leo-1NP_502135.1 Leo1 167..328 CDD:281933 82/160 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158876
Domainoid 1 1.000 180 1.000 Domainoid score I2092
eggNOG 1 0.900 - - E1_KOG2428
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 226 1.000 Inparanoid score I2233
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004097
OrthoInspector 1 1.000 - - oto19119
orthoMCL 1 0.900 - - OOG6_104699
Panther 1 1.100 - - LDO PTHR23146
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1979
SonicParanoid 1 1.000 - - X4466
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.820

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