DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atu and leo1

DIOPT Version :9

Sequence 1:NP_524240.1 Gene:Atu / 40684 FlyBaseID:FBgn0019637 Length:725 Species:Drosophila melanogaster
Sequence 2:XP_002936391.3 Gene:leo1 / 100135118 XenbaseID:XB-GENE-5828183 Length:718 Species:Xenopus tropicalis


Alignment Length:746 Identity:265/746 - (35%)
Similarity:369/746 - (49%) Gaps:124/746 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SDDDSGS--SGSSRSGSRS-----------VTPQGGSAPGSQRSRRSGSGSDRSRSGSRSSRSRS 57
            ||.|.|:  |||:||||.|           |.|......|.  ......||..|.|.:||.||.:
 Frog    27 SDSDQGNDGSGSNRSGSDSDRDEDDDEHAAVKPSNKELFGD--DSEDEVGSQHSGSYNRSERSYN 89

  Fly    58 GSGSPRSARSGSAESRHSQLSGSA-----------------RSKRSRSAHSRRSGSARSRKSGTP 105
            .|.:..|.:..:.:|...|.|||.                 .|.||.:..|.:..::...|.|..
 Frog    90 ASETAHSDQEVNDQSDAEQHSGSEALHDEDNDEDVGRRSDHSSPRSEADGSDKDANSDDEKWGRE 154

  Fly   106 E-SPQSHRSGSLQS-----RKSGSPQSRRSGSPQSRKSGSTHSRRSGSAHSRRSGSARS---RKS 161
            : |.||.....:|:     :.|...:.|:|.....|.|.....:.:..:......:..|   ..|
 Frog   155 DKSDQSDEDEKMQNSDDELQHSDHDEHRQSDEDGQRPSSDVEEQENHQSDDEEQDNHHSDDLHNS 219

  Fly   162 GSAQSDRSESRSRSHS-GSLKGNEESRSNSPNLQ---IDVERANSKSGSRSRSRSRSGSRTSRSR 222
            ...::||.....|.|| |..:.:.:|......||   .:.||.:|:...:......:..|.|...
 Frog   220 DDEENDRQHYNDRQHSDGEEQDHRQSEDEENELQHSDDEQERRHSEDEQQHSDDEINERRQSDDE 284

  Fly   223 SKTGTPSPNRSRSGSASGSGSDVGVPKKKARKASGSDQEKK---KSGSDSDIEESPTKAKKSRLI 284
            .:..:...|...........||            |.:||:|   :.||||:.|....:.||:...
 Frog   285 DRQHSDEDNERHHSDDEQQQSD------------GEEQERKSESQKGSDSEDEIGRQRHKKAIAS 337

  Fly   285 DTDSDSNQDVGKKAPAAADIFGDADDISDDED-EAGPAARKSPVRSKSRSQSKSHSHSRSMSHSR 348
            |:|.||:.|..|....|:|:||||||||...| |..|.....|:......|.             
 Frog   338 DSDMDSDDDEPKGKQNASDLFGDADDISSGSDGEDKPPTPGQPMDEDGMDQD------------- 389

  Fly   349 SRSRSRSRDKVESQVESAPKEDEPEPLPETRIDVEIPRISADLGKEQHFIKLPNFLSVVTHPFDP 413
                                ..|.|.:|||||:||||:::.|||.:.:|:||||||||...||||
 Frog   390 --------------------HPEEEAVPETRIEVEIPKVNTDLGNDLYFVKLPNFLSVEPRPFDP 434

  Fly   414 ETYEDEIDEEETMDEEGRQRIKLKVSNTIRWREYMNNKGDMVRESNARFVRWSDGSMSLHLGNEI 478
            :.||||.::||.:|||||.|:||||.||||||...:.:|..|||||||.|:|||||||||||||:
 Frog   435 QYYEDEFEDEEMLDEEGRTRLKLKVENTIRWRTRKDEEGSDVRESNARIVKWSDGSMSLHLGNEV 499

  Fly   479 FDAYRQPLLGDHNHLFVRQGTGLQGQSVFRTKLTFRPHSTESFTHKKMTMSLADRSSKTSGIKIL 543
            ||.|:.||.|||||||:|||||||||:||:||||||||||:|.||:|||:|||||.|||..|:||
 Frog   500 FDVYKAPLQGDHNHLFIRQGTGLQGQAVFKTKLTFRPHSTDSATHRKMTLSLADRCSKTQKIRIL 564

  Fly   544 TQVGKDPTTDRPTQLREEEAKLRQAMRNQHKSLPKKKKPGAGEPLIGGGTSSY----QHDEGSDD 604
            ...|:||.:.|...:::||.:||.::|.:.:....::|...     .|.:::|    ::|:..:.
 Frog   565 PMAGRDPESQRSEMIKKEEERLRASIRRESQQRRMREKQHQ-----RGLSANYLEPDRYDDEEEG 624

  Fly   605 ENAISLSAIKNRYKKGSGAGQAEVKASTIYSSDEDEGSDFE-ARRSKKVDKAKASKALRDSDSES 668
            |.:|||:|||||||.|      ..:.:.|||||.|||||.: |:|..|..|..:.:..:|.|.|.
 Frog   625 EESISLAAIKNRYKGG------REERARIYSSDSDEGSDEDKAQRLLKAKKLNSDEEDQDQDEEG 683

  Fly   669 D-AGSAKSGHSNKSGGEGGSASGSENEGSQK 698
            : :|..|             |:..|::.|:|
 Frog   684 EISGKRK-------------AAEDEDKASKK 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtuNP_524240.1 Leo1 396..550 CDD:281933 108/153 (71%)
leo1XP_002936391.3 MDN1 <62..400 CDD:227596 86/384 (22%)
Leo1 417..579 CDD:397901 111/161 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 241 1.000 Domainoid score I2208
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 375 1.000 Inparanoid score I2051
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004097
OrthoInspector 1 1.000 - - oto105534
Panther 1 1.100 - - LDO PTHR23146
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4466
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.060

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