DRSC/TRiP Functional Genomics Resources

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Protein Alignment chia.3 and Cht10

DIOPT Version :10

Sequence 1:NP_998378.1 Gene:chia.3 / 406819 ZFINID:ZDB-GENE-040426-2891 Length:471 Species:Danio rerio
Sequence 2:NP_001036422.1 Gene:Cht10 / 3355116 FlyBaseID:FBgn0250907 Length:2286 Species:Drosophila melanogaster


Alignment Length:484 Identity:173/484 - (35%)
Similarity:257/484 - (53%) Gaps:68/484 - (14%)


- Green bases have known domain annotations that are detailed below.


Zfish    22 EMACYFTNWSQYRPGIGKYTPANVDPYLCTHLIYAFSIINQRNELV--TYE-WND--ETLYKAFN 81
            ::.||||||:.||.|||::||.:::..||||:||.|::::. :|||  |:: |.|  ...|....
  Fly   966 KVICYFTNWAWYRKGIGRFTPDDINTELCTHVIYGFAVLDY-SELVLRTHDSWADVENNFYTRVT 1029

Zfish    82 ELKNKNPTLKTLLAVGGWNFGSA-QFSIMVSNPANRKTFIQSTIKFLRTHGFDGLDLDWEYPGA- 144
            .||:|.  :|..||:||||.... ::|.:|.:|..|..|::..::|:..:||:|||||||||.. 
  Fly  1030 SLKSKG--IKVSLALGGWNDSQGDKYSRLVRSPMARSRFVRHALEFIEKYGFEGLDLDWEYPVCW 1092

Zfish   145 -----RGSPPEDKQRFTLLCKELVAAYEAESKATGNPQLMLTAAVSAGKGTIDDGYEIAEIAKYL 204
                 :|| .|:|..||...:||..|:....       |||:.|||..:..||.||:|.::::|.
  Fly  1093 QTECNKGS-TEEKDGFTAWVQELSEAFRPRG-------LMLSTAVSPSRKIIDAGYDIPQLSRYF 1149

Zfish   205 NFINVMTYDFHGTWERFTGHNSPLYQGSKDEGDLIYFNTDYAMRYWRDNGTPVEKLRMGFAAYGR 269
            ::|.||||||||.|::.|||.:|||....|  |..|||.:|::.||.:.|.|.:||.||...||:
  Fly  1150 DWIAVMTYDFHGHWDKKTGHVAPLYHHPDD--DFEYFNVNYSINYWMEKGAPSQKLVMGIPLYGQ 1212

Zfish   270 TFRLTSSDTS-VGAPASGPASAGTYTREAGFWSYYEICGFLEGTTIQWIDDQ---KVPYATKNSE 330
            :|.|.::::| :.|.|..|..||.:||.|||.:|||||..:.....|.:.|:   ..|||.|.::
  Fly  1213 SFTLENTNSSGLNAKAPAPGEAGEFTRAAGFLAYYEICERVNRQGWQVVHDEFGRMGPYAYKGTQ 1277

Zfish   331 WVGFDTKESYETKVRYLKDKNFGGAFVWALDLDDFAGQFCSQGNHPLMAHLRNLLD-----IELP 390
            ||.:|:.:....|...::....||..|||||||||..: |..|.|||:..:.|:|.     :|:|
  Fly  1278 WVSYDSPDMVRKKSLLVRSLKLGGGMVWALDLDDFKNR-CGNGVHPLLTEIHNVLKDPPSLMEIP 1341

Zfish   391 -PMPSTTTPKPGQS-----------TTRPTTTTTTTTHAPGPGFCNGKPDGLYAHPNDPNKYYSC 443
             |:.:|.|..||..           ..:|......|....|.     :.:|:.    |||     
  Fly  1342 GPIETTPTEYPGMEEEIHESNGEGPEVQPIEAVMQTCENEGE-----EHEGIL----DPN----- 1392

Zfish   444 AGGHTF----VEKCAVGTVFDDSCKCCVW 468
               |..    :|...:.|.|...|....|
  Fly  1393 ---HVLEEENIEATEMATEFKIICYFTNW 1418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chia.3NP_998378.1 GH18_chitolectin_chitotriosidase 25..385 CDD:119351 152/375 (41%)
ChtBD2 421..469 CDD:214696 10/52 (19%)
Cht10NP_001036422.1 GH18_chitolectin_chitotriosidase 221..586 CDD:119351
ChtBD2 697..737 CDD:214696
CBM_14 801..848 CDD:426342
CBM_14 875..918 CDD:426342
GH18_chitolectin_chitotriosidase 967..1331 CDD:119351 152/377 (40%)
GH18_chitolectin_chitotriosidase 1411..1774 CDD:119351 2/8 (25%)
ChtBD2 1834..1871 CDD:214696
GH18_chitolectin_chitotriosidase 1910..2274 CDD:119351
Blue background indicates that the domain is not in the aligned region.

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