DRSC/TRiP Functional Genomics Resources

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Protein Alignment SecS and DPL1

DIOPT Version :10

Sequence 1:NP_649556.3 Gene:SecS / 40681 FlyBaseID:FBgn0037347 Length:478 Species:Drosophila melanogaster
Sequence 2:NP_174119.1 Gene:DPL1 / 839691 AraportID:AT1G27980 Length:544 Species:Arabidopsis thaliana


Alignment Length:473 Identity:90/473 - (19%)
Similarity:150/473 - (31%) Gaps:164/473 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KLVP--DNY-----------LQLGLAAQRSKQRSF-------KELLEKRKLPK------------ 43
            |::|  .||           ||.|.::::..:...       .|:|||.:..|            
plant    71 KMIPGVQNYIDAEKQKVVDQLQSGSSSKKKNKTEVLPVKGLGVEVLEKMENEKRNDAIWQGKCSG 135

  Fly    44 ----NGWSDERIEELVHMLASLDSNNYPHKVGLGEREARIACKLVARRHYNFGHGIGRSGDLLEA 104
                .|...|....|::...|:.::..|..:.:.:...|...::||           .:..||.:
plant   136 TVYIGGAESEGHFSLINQACSMFAHTNPLHIDVFQSVVRFESEVVA-----------MTAALLGS 189

  Fly   105 QPKAAGSTLLARLTNALILDLIRGIGLPSCAGCFLVPMCTGMTLTLCLQSLRKRRPGARYVLWSR 169
            :..|:|..:...:|:.         |..|              :.|.::|.|             
plant   190 KETASGGQICGNMTSG---------GTES--------------IVLAVKSSR------------- 218

  Fly   170 IDQKSCFKAITATGLVPVVIPCLIKGESLNTNVD----LFREKIKSLGVD--------------- 215
             |.....|.||.        |.:|..||.::..|    .|:.|:..:.||               
plant   219 -DYMKYKKGITR--------PEMIIPESGHSAYDKAAQYFKIKLWRVPVDKDFRADVKATRRHIN 274

  Fly   216 -SILCLYTTTSCFAPRNSDDIAEVSKLSKQWQIPHLVNNAYGLQAKEIVNQLECANRVGRIDYFV 279
             :.:.:..:...|.....|.|.|:.:|:..:.|...|:...|........:|  ..::...|:.|
plant   275 RNTIMIVGSAPGFPHGIIDPIEELGQLALSYGICFHVDLCLGGFVLPFARKL--GYQIPPFDFSV 337

  Fly   280 Q-----SSD--KNLLVPVGSAIVASFNESV-LHD------------VASTYAGRASGSQSLDVLM 324
            |     |.|  |..|.|.|::.|...|..: .|.            |:.|.||...||.......
plant   338 QGVTSISVDVHKYGLAPKGTSTVLYRNHEIRKHQFVAVTEWSGGLYVSPTIAGSRPGSLVAGAWA 402

  Fly   325 TLLSLGRNGFRLLFDQRGENFNYLRENLRKFAE------PRGEIV------ID------------ 365
            .::|||..|:.....:..|....|.|.:|:..|      |...||      :|            
plant   403 AMMSLGEEGYLQNTSKIMEASKRLEEGVREIHELFVIGKPDMTIVAFGSKALDIFEVNDIMSSKG 467

  Fly   366 ------SRFNSISLAITL 377
                  .|.|||.:.|||
plant   468 WHLNALQRPNSIHICITL 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SecSNP_649556.3 AAT_I 12..457 CDD:450240 89/472 (19%)
DPL1NP_174119.1 AAT_I 158..501 CDD:450240 74/386 (19%)

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