Protein Alignment SecS and GAD

DIOPT Version :10

• Sequence 1: NP_649556.3
• Gene: SecS / 40681
• FlyBaseID: FBgn0037347
• Length: 478
• Species: Drosophila melanogaster
• Sequence 2: NP_197235.1
• Gene: GAD / 831599
• AraportID: AT5G17330
• Length: 502
• Species: Arabidopsis thaliana
• Alignment Length: 556
• Identity: 101/556 - (18%)
• Similarity: 173/556 - (31%)
• Gaps: 183/556 - (32%)

  Fly     3 FEQVNIPEKLVPDNYLQLGLAAQRSKQRSFKELLEKRKLPKN----------GWSDERIEELVHM 57
            :.:.::|...:|:|.:        .|:.:::.:.::..|..|          .|.:...::|:
plant    22 YVRTSLPRFKMPENSI--------PKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLI-- 76

  Fly    58 LASLDSN-----NYPHKVGLGEREARIACKLVARRHYNFGHGIGRSGDLLEAQPKAAGSTLLARL 117
            ::|::.|     .||....|..|     |                             ..::|.|
plant    77 MSSINKNYVDMDEYPVTTELQNR-----C-----------------------------VNMIAHL 107

  Fly   118 TNALILDLIRGIGLPSCAGCFLVPMCTGMTLTLCLQSLRKR------RP----GAR-YVLWSR-- 169
            .||.:.:....:|: ...|.....|..|:......|:.||.      :|    ||. .|.|.:
plant   108 FNAPLEEAETAVGV-GTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFA 171

  Fly   170 ------------------IDQKSCFKAITA-TGLVPVVIPCLIKGESLNTNV--DLFREKIKSLG 213
                              :|.:.....:.. |..|..::...:.||..:..:  ||..||.|..|
plant   172 RYFEVELKEVKLSEGYYVMDPQQAVDMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETG 236

  Fly   214 VDSILCLYTTTSCFAPRNSDDIAEVSKLSKQWQIP-HLVNNAYGLQAKEIVNQLECANRVGRIDY 277
                                           |..| |:...:.|..|..:..:||...|:..:..
plant   237 -------------------------------WDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKS 270

  Fly   278 FVQSSDKNLLVPVGSAIVASFN------ESVLHDVASTYAG----------RASGSQSLDVLMTL 326
            ...|..|..||..|...|...|      |.:.|   ..|.|          ....||.:.....|
plant   271 INVSGHKYGLVYAGIGWVIWRNKEDLPEELIFH---INYLGADQPTFTLNFSKGSSQVIAQYYQL 332

  Fly   327 LSLGRNGFRLLFDQRGENFNYLRENLRKFAEPRGEIVIDSRFNSIS----LAITLATLAGDQMKS 387
            :.||..|:|.:.:...||...|||.|.|          ..|||.:|    :.:...:|......:
plant   333 IRLGHEGYRNVMENCRENMIVLREGLEK----------TERFNIVSKDEGVPLVAFSLKDSSCHT 387

  Fly   388 ITKLGSMLHMRGVSGARVIVPGQNKTIDGHEFLDFGSHRSNLQVPY-----LTVAAGIGITREEI 447
            ..::..||...|     .|||......:       ..|.:.|:|..     .|:|..:.|..|::
plant   388 EFEISDMLRRYG-----WIVPAYTMPPN-------AQHITVLRVVIREDFSRTLAERLVIDIEKV 440

  Fly   448 DKFFD-----IFNKCWNQIFQTKNEKIMSLLETTIK 478
            .:..|     :.:|.  .:.|.|:|.....|..|:|
plant   441 MRELDELPSRVIHKI--SLGQEKSESNSDNLMVTVK 474

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SecS	NP_649556.3	AAT_I	12..457	CDD:450240	93/524 (18%)
GAD	NP_197235.1	Glu-decarb-GAD	16..445	CDD:130848	93/523 (18%)