DRSC/TRiP Functional Genomics Resources

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Protein Alignment SecS and Gadl1

DIOPT Version :9

Sequence 1:NP_649556.3 Gene:SecS / 40681 FlyBaseID:FBgn0037347 Length:478 Species:Drosophila melanogaster
Sequence 2:NP_001382689.1 Gene:Gadl1 / 73748 MGIID:1920998 Length:522 Species:Mus musculus


Alignment Length:441 Identity:81/441 - (18%)
Similarity:137/441 - (31%) Gaps:148/441 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 EARIACKLVARRHYNFGHGIGRSGDLLEAQPKAAGSTLLARLTNALILDLIRGIGLPSC--AGCF 138
            |..:..|::....:..|.||...|          ||     ::|...::|.|....|..  .|..
Mouse   157 EEAVLKKMIECVGWKEGDGIFNPG----------GS-----VSNMCAMNLARYRHCPDIKEKGLS 206

  Fly   139 LVPMCTGMTLTLCLQSLRKRRP----GARYVLWSRID----------QKSCFKAITATGLVPVVI 189
            .:|.....|...|..|::|...    |.:.|.:...|          :|..::| ...|.||.::
Mouse   207 GLPRLILFTSAECHYSMKKAASFLGIGTQNVYFVETDGRGKMIPEDLEKQIWQA-RQEGAVPFLV 270

  Fly   190 PCLIKGESLNTNVDLFREKIKSLGVDSILCLYTTTSCFAPRNSDDIAEVSKLSKQWQIPHLVNNA 254
             |...|.                         |....|.|  .|:||||.:....|.  | |:.:
Mouse   271 -CATSGT-------------------------TVLGAFDP--LDEIAEVCERHGLWL--H-VDAS 304

  Fly   255 YGLQAKEIVNQLECANRVGRIDYFVQSSDKNLLVPVG-SAIVASFNESVL---HDVASTY----- 310
            :|..|..........:.:.|.|....:..|.|:..:. ||::......:|   :...:||     
Mouse   305 WGGSALVSRKHRRLLHGIHRADSVAWNPHKMLMAGIQCSALLVKDKSDLLKKCYSAKATYLFQQD 369

  Fly   311 ----AGRASGSQSLD---------VLMTLLSLG------------------------RNGFRLLF 338
                ....:|.:|:.         ..||..:||                        |.||:||.
Mouse   370 KFYDVSYDTGDKSIQCSRRPDAFKFWMTWKALGTSGLEERVNRAFALSRYLVDEIKKREGFKLLM 434

  Fly   339 DQRGEN--FNYLRENLRKFAEPRGEIVIDSRFNSISLAITLATLAGDQMKSITKLGSMLHMRGVS 401
            :....|  |.|:..:||:..|.      ...:..:||      :|....:.:.|.||::      
Mouse   435 EPEYTNVCFWYIPPSLREMEEG------PEFWRKLSL------VAPAIKEKMMKKGSLM------ 481

  Fly   402 GARVIVPGQNKTIDGHEFLDFGSHRSNLQVPYLTVAAGIGITREEIDKFFD 452
                              |.:..||..:.. :..|.....::||::|...|
Mouse   482 ------------------LGYQPHRGKVNF-FRQVVISPQVSREDMDFLLD 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SecSNP_649556.3 AAT_I 12..457 CDD:302748 81/441 (18%)
Gadl1NP_001382689.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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