Protein Alignment SecS and Sepsecs

DIOPT Version :10

• Sequence 1: NP_649556.3
• Gene: SecS / 40681
• FlyBaseID: FBgn0037347
• Length: 478
• Species: Drosophila melanogaster
• Sequence 2: NP_001121759.1
• Gene: Sepsecs / 679383
• RGDID: 1589491
• Length: 504
• Species: Rattus norvegicus
• Alignment Length: 461
• Identity: 223/461 - (48%)
• Similarity: 311/461 - (67%)
• Gaps: 0/461 - (0%)

  Fly     1 MNFEQVNIPEKLVPDNYLQLGLAAQRSKQRSFKELLEKRKLPKNGWSDERIEELVHMLASLDSNN 65
            ||.|.....|:.|...|::.|..|:|:.:.....|:|:.|.|::||.:..:|..:|.||.:||||
  Rat     1 MNPESFAAGERRVTPAYVRQGCEARRAHEHLIWLLIEQGKCPEDGWDESTLELFLHELAVMDSNN 65

  Fly    66 YPHKVGLGEREARIACKLVARRHYNFGHGIGRSGDLLEAQPKAAGSTLLARLTNALILDLIRGIG 130
            :....|:||||.|:|..|||||||.|.||||||||:...|||||||:||.::||:|:|::|:..|
  Rat    66 FLGNCGVGEREGRVASALVARRHYRFIHGIGRSGDISAVQPKAAGSSLLNKITNSLVLNVIKLAG 130

  Fly   131 LPSCAGCFLVPMCTGMTLTLCLQSLRKRRPGARYVLWSRIDQKSCFKAITATGLVPVVIPCLIKG 195
            :.|.|.||:|||.|||:||||..:||.:||.|:|::|.|||||||||::...|..||||..:::|
  Rat   131 VHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVLEG 195

  Fly   196 ESLNTNVDLFREKIKSLGVDSILCLYTTTSCFAPRNSDDIAEVSKLSKQWQIPHLVNNAYGLQAK 260
            :.|.|::.....||:.||.:.||||::||:|||||..|.:.|::.:...:.|||:||||||||:.
  Rat   196 DELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSS 260

  Fly   261 EIVNQLECANRVGRIDYFVQSSDKNLLVPVGSAIVASFNESVLHDVASTYAGRASGSQSLDVLMT 325
            :.::.::...||||||.||||.|||.:||||.||:|.||:|.:.:::..|.||||.|.|||||:|
  Rat   261 KCMHLIQQGARVGRIDVFVQSLDKNFMVPVGGAIIAGFNDSFIQEISKMYPGRASASPSLDVLIT 325

  Fly   326 LLSLGRNGFRLLFDQRGENFNYLRENLRKFAEPRGEIVIDSRFNSISLAITLATLAGDQMKSITK 390
            |||||.||::.|..:|.|.|.||...|:|.||...|.::.:..|.||||:||.||.|.|.:::|:
  Rat   326 LLSLGCNGYKKLLKERKEMFAYLSTQLQKLAEAHNERLLKTPHNPISLAMTLETLDGHQDRAVTQ 390

  Fly   391 LGSMLHMRGVSGARVIVPGQNKTIDGHEFLDFGSHRSNLQVPYLTVAAGIGITREEIDKFFDIFN 455
            |||||..|.|||||.:..|..:|:.||.|..|.||..|....||..||.||:..:::|.|....:
  Rat   391 LGSMLFTRQVSGARAVPLGSVQTVSGHTFRGFMSHTDNYPCAYLNAAAAIGMKVQDVDLFIKRLD 455

  Fly   456 KCWNQI 461
            ||.|.:
  Rat   456 KCLNTV 461

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SecS	NP_649556.3	AAT_I	12..457	CDD:450240	216/444 (49%)
Sepsecs	NP_001121759.1	selenium_SpcS	13..458	CDD:211833	217/444 (49%)