DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SecS and CSAD

DIOPT Version :9

Sequence 1:NP_649556.3 Gene:SecS / 40681 FlyBaseID:FBgn0037347 Length:478 Species:Drosophila melanogaster
Sequence 2:XP_024304779.1 Gene:CSAD / 51380 HGNCID:18966 Length:620 Species:Homo sapiens


Alignment Length:531 Identity:107/531 - (20%)
Similarity:182/531 - (34%) Gaps:159/531 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 PEKLVPDNYLQLGLAAQRSKQRSFKELLEK-----RKLPKNG---WSDERIEEL-VHMLA----- 59
            ||:|  ...|.|.|   ||:..|.|::||:     |...|.|   :.::....| .|.||     
Human   145 PEEL--KQLLDLEL---RSQGESQKQILERCRAVIRYSVKTGHPRFFNQLFSGLDPHALAGRIIT 204

  Fly    60 -SLDSNNYPHKVG----LGEREARIACKLVARRHYNFGHGIGRSGDLLEAQPKAAGSTLLARLTN 119
             ||:::.|.:::.    |.|.|  :..||.|...::.|.||...|          ||     ::|
Human   205 ESLNTSQYTYEIAPVFVLMEEE--VLRKLRALVGWSSGDGIFCPG----------GS-----ISN 252

  Fly   120 ALILDLIRGIGLPSC--AGCFLVPMCTGMTLTLCLQSLRKRRPGARYVL---------------- 166
            ...::|.|....|.|  .|...:|   .:.|....:..::.||....::                
Human   253 MYAVNLARYQRYPDCKQRGLRTLP---PLALFTSKEVGKRHRPNPGLLILISSHVTTPSRRELRF 314

  Fly   167 ---------WSRIDQKSCFKA----------------------ITATGLVPVVIPC----LIKG- 195
                     |||:.::..:..                      |..:|.||.::..    .:.| 
Human   315 WDLAPTVSEWSRLMREGKWSPRIWRGRLVWPRLRLTFHFFETFILDSGAVPFLVSATSGTTVLGA 379

  Fly   196 -ESLNTNVDLFREKIKSLGVD-----SILCLYTTTSCF-APRNSDDIAEVSKLSKQWQIPHLVNN 253
             :.|....|:.:.....|.||     |:|...|..... ..:.:|.:|        |. ||.: .
Human   380 FDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVA--------WN-PHKL-L 434

  Fly   254 AYGLQAKEIVNQLECANRVGRIDYFVQSSDKNLLVPVGSAIVASFNESVLHDVASTYAGR-ASGS 317
            |.|||...::.| :.:|.:.|..              ||.....|.:...:|||.....: ....
Human   435 AAGLQCSALLLQ-DTSNLLKRCH--------------GSQASYLFQQDKFYDVALDTGDKVVQCG 484

  Fly   318 QSLDVLMTLL---SLGRNGFRLLFDQRGENFNYLRENLRKFAEPRGEIVIDSRFNSISLAITLAT 379
            :.:|.|...|   :.|..|.....||......||.|.::|  ....|:|::..|.::.......:
Human   485 RRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKK--REGFELVMEPEFVNVCFWFVPPS 547

  Fly   380 LAG-----DQMKSITKLGSMLHMRGVSGARVIVPGQNKTIDGHEFLDFGSH--RSNLQVPYLTVA 437
            |.|     |..:.::|:..:|..|.|.             :|...:.:..|  |.|.   :..|.
Human   548 LRGKQESPDYHERLSKVAPVLKERMVK-------------EGSMMIGYQPHGTRGNF---FRVVV 596

  Fly   438 AGIGITREEID 448
            |...:|..::|
Human   597 ANSALTCADMD 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SecSNP_649556.3 AAT_I 12..457 CDD:302748 105/528 (20%)
CSADXP_024304779.1 DOPA_deC_like 185..616 CDD:99743 92/486 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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