DRSC/TRiP Functional Genomics Resources

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Protein Alignment SecS and CSAD

DIOPT Version :10

Sequence 1:NP_649556.3 Gene:SecS / 40681 FlyBaseID:FBgn0037347 Length:478 Species:Drosophila melanogaster
Sequence 2:XP_054228176.1 Gene:CSAD / 51380 HGNCID:18966 Length:652 Species:Homo sapiens


Alignment Length:560 Identity:111/560 - (19%)
Similarity:181/560 - (32%) Gaps:185/560 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 PEKLVPDNYLQLGLAAQRSKQRSFKELLEK-----RKLPKNG---WSDERIEEL-VHMLA----- 59
            ||:|  ...|.|.|   ||:..|.|::||:     |...|.|   :.::....| .|.||     
Human   145 PEEL--KQLLDLEL---RSQGESQKQILERCRAVIRYSVKTGHPRFFNQLFSGLDPHALAGRIIT 204

  Fly    60 -SLDSNNYPHKVG----LGEREARIACKLVARRHYNFGHGIGRSGDLLEAQPKAAGSTLLARLTN 119
             ||:::.|.:::.    |.|.|  :..||.|...::.|.||...|          ||     ::|
Human   205 ESLNTSQYTYEIAPVFVLMEEE--VLRKLRALVGWSSGDGIFCPG----------GS-----ISN 252

  Fly   120 ALILDLIRGIGLPSC--AGCFLVPMCTGMT--------------LTLCLQSLRKRRPGARYVL-- 166
            ...::|.|....|.|  .|...:|.....|              |.|....|.:..||....|  
Human   253 MYAVNLARYQRYPDCKQRGLRTLPPLALFTSKEVGKRHRPNPGLLILISSQLSRDLPGLLPALPT 317

  Fly   167 --------------------------------------WSRIDQKSCFKA--------------- 178
                                                  |||:.::..:..               
Human   318 SSKASLPPGGCASFQSRSVTTPSRRELRFWDLAPTVSEWSRLMREGKWSPRIWRGRLVWPRLRLT 382

  Fly   179 -------ITATGLVPVVIPC----LIKG--ESLNTNVDLFREKIKSLGVD-----SILCLYTTTS 225
                   |..:|.||.::..    .:.|  :.|....|:.:.....|.||     |:|...|...
Human   383 FHFFETFILDSGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRH 447

  Fly   226 CF-APRNSDDIAEVSKLSKQWQIPHLVNNAYGLQAKEIVNQLECANRVGRIDYFVQSSDKNLLVP 289
            .. ..:.:|.:|        |. ||.: .|.|||...::.| :.:|.:.|..             
Human   448 LLDGIQRADSVA--------WN-PHKL-LAAGLQCSALLLQ-DTSNLLKRCH------------- 488

  Fly   290 VGSAIVASFNESVLHDVASTYAGR-ASGSQSLDVLMTLL---SLGRNGFRLLFDQRGENFNYLRE 350
             ||.....|.:...:|||.....: ....:.:|.|...|   :.|..|.....||......||.|
Human   489 -GSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVE 552

  Fly   351 NLRKFAEPRGEIVIDSRFNSISLAITLATLAG-----DQMKSITKLGSMLHMRGVSGARVIVPGQ 410
            .::|  ....|:|::..|.::.......:|.|     |..:.::|:..:|..|.|.         
Human   553 EMKK--REGFELVMEPEFVNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMVK--------- 606

  Fly   411 NKTIDGHEFLDFGSH--RSNLQVPYLTVAAGIGITREEID 448
                :|...:.:..|  |.|.   :..|.|...:|..::|
Human   607 ----EGSMMIGYQPHGTRGNF---FRVVVANSALTCADMD 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SecSNP_649556.3 AAT_I 12..457 CDD:450240 109/557 (20%)
CSADXP_054228176.1 DOPA_deC_like 185..648 CDD:99743 96/515 (19%)

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