DRSC/TRiP Functional Genomics Resources

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Protein Alignment SecS and csad

DIOPT Version :9

Sequence 1:NP_649556.3 Gene:SecS / 40681 FlyBaseID:FBgn0037347 Length:478 Species:Drosophila melanogaster
Sequence 2:XP_009295318.1 Gene:csad / 492476 ZFINID:ZDB-GENE-041114-36 Length:544 Species:Danio rerio


Alignment Length:448 Identity:81/448 - (18%)
Similarity:162/448 - (36%) Gaps:120/448 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 SLDSNNYPHKVG----LGEREARIACKLVARRHYNFGHGIGRSGDLLEAQPKAAGSTLLARLTNA 120
            :|:::.|.::|.    |.|.|  :..||.:...::.|.||...|          ||     ::|.
Zfish   161 TLNTSQYTYEVAPVFVLMEEE--VISKLRSLVGWSEGDGIFCPG----------GS-----MSNM 208

  Fly   121 LILDLIRGIGLP--SCAGCFLVPMCTGMTLTLCLQSLRKRRPGARY-------VLWSRIDQKSCF 176
            ..:::.|....|  ...|.:..|.   |.:....||....:.||.:       |...::|:..  
Zfish   209 YAINVARYWAFPQVKTKGLWAAPR---MAIFTSQQSHYSVKKGAAFLGIGTENVFIVQVDESG-- 268

  Fly   177 KAITATGLVPVVIPCLIKGESLNTNVDLFREKIKSLGVDSILCLYTTTSCFAPRNSDD----IAE 237
                  .::|         |.|...:      :::...|::......|:....:.:.|    ||:
Zfish   269 ------SMIP---------EDLEAKI------VQAKSQDAVPFFVNATAGTTVQGAFDPLKRIAD 312

  Fly   238 VSKLSKQWQIPHLVNNAYG------LQAKEIVNQLECANRVGRIDYFVQSSDKNLLVPVGSAIVA 296
            :.:.:..|.  | |:.|:|      .:.:.:|..:|.||.|      ..:..|.||..:..:::.
Zfish   313 ICERNGMWM--H-VDAAWGGSVLFSKKHRHLVAGIERANSV------TWNPHKMLLTGLQCSVIL 368

  Fly   297 SFNESV-----LHDVASTY---------AGRASGSQSL------DVLMTLL---SLGRNGFRLLF 338
             |.::.     .|...:||         ....:|.:|:      |.|...|   ::|.:|.....
Zfish   369 -FRDTTNLLMHCHSAKATYLFQQDKFYDTSLDTGDKSIQCGRKVDCLKLWLMWKAIGASGLSQRV 432

  Fly   339 DQRGENFNYLRENLRKFAEPRGEIVIDSRFNSISLAITLATLAG-----DQMKSITKLGSMLHMR 398
            |:......||.|.:.|  ....::|....|.::.......:|.|     |..:.::|:..::..|
Zfish   433 DKAFALTRYLVEEMEK--RENFQLVCKGPFVNVCFWFIPPSLKGKENSPDYQERLSKVAPVIKER 495

  Fly   399 GVSGARVIVPGQNKTIDGHEFLDFGSHRSNLQVPYLTVAAGIGITREEIDKFFDIFNK 456
            .:....::|..|  .:|.|  ::|          :..|.....:|.:::|.|.|...|
Zfish   496 MMKRGTMMVGYQ--PMDEH--VNF----------FRMVVVSPQLTTKDMDFFLDEMEK 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SecSNP_649556.3 AAT_I 12..457 CDD:302748 81/448 (18%)
csadXP_009295318.1 DOPA_deC_like 140..540 CDD:99743 81/448 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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