DRSC/TRiP Functional Genomics Resources

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Protein Alignment SecS and ddc

DIOPT Version :9

Sequence 1:NP_649556.3 Gene:SecS / 40681 FlyBaseID:FBgn0037347 Length:478 Species:Drosophila melanogaster
Sequence 2:NP_998507.1 Gene:ddc / 406651 ZFINID:ZDB-GENE-040426-2656 Length:480 Species:Danio rerio


Alignment Length:314 Identity:73/314 - (23%)
Similarity:116/314 - (36%) Gaps:84/314 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 IKGESLNTNVDLFREKIKSLG-VDSILC--LYTTTSCFAPRNSDDIAEVSKL---SKQWQIPHLV 251
            ::|::|..   :.:|. |:.| :....|  |.||.||    ..|.|.|:..:   .|.|.  | :
Zfish   217 VRGDALER---ILKED-KAAGLIPFFFCATLGTTASC----AFDCITELGPICNAEKMWM--H-I 270

  Fly   252 NNAYGLQA------KEIVNQLECANRVGRIDYFVQSSDKNLLVPVGSA---------IVASFNES 301
            :.||...|      :.::|.:|.|      |.|..:..|.||:....:         |:.:|...
Zfish   271 DAAYAGSAFICPEFRPLLNGIEFA------DSFNFNPHKWLLINFDCSAMWVKKRADIIGAFKME 329

  Fly   302 VL---HDVASTYAGRASGSQSLDVLMTLLSLGRNGFRLL-----FDQRGENF--NYLRENLRKFA 356
            .|   ||      .:.||..: |.....:.|||. ||.|     |...|...  .|:|:::....
Zfish   330 PLYLKHD------HQESGLVT-DYRHWQIPLGRR-FRSLKMWFVFRMYGLKALQAYIRKHVGLAK 386

  Fly   357 EPRGEIVIDSRFNSISLAITLATLAGDQMKSITKLGSMLHMRGVSGARVI--VPGQNKTIDGHEF 419
            |....:..|.|| .||..:.:. |...::|...:|...| ::.::.||.|  ||           
Zfish   387 EFEAFVRADQRF-EISADVVMG-LVCFRLKGPNELSENL-LKRINSARKIHLVP----------- 437

  Fly   420 LDFGSHRSNLQVPYLTVAAGIGITREEIDKFFDIFNKCWNQIFQTKNEKIMSLL 473
                .|.:.|.|....|.|....:|.        ..:.|..|.|..:|.:..||
Zfish   438 ----CHLAGLFVLRFAVCARATESRH--------VQEAWCHIRQLASELLQELL 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SecSNP_649556.3 AAT_I 12..457 CDD:302748 67/296 (23%)
ddcNP_998507.1 AAT_I 1..478 CDD:302748 71/311 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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