DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SecS and HDC

DIOPT Version :9

Sequence 1:NP_649556.3 Gene:SecS / 40681 FlyBaseID:FBgn0037347 Length:478 Species:Drosophila melanogaster
Sequence 2:XP_016877583.1 Gene:HDC / 3067 HGNCID:4855 Length:697 Species:Homo sapiens


Alignment Length:550 Identity:110/550 - (20%)
Similarity:174/550 - (31%) Gaps:205/550 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 NNYPHKVGLG-----EREARIACKLVARRHYNFGHGIGRSGDLLE---AQPKAAGSTLLARLT-- 118
            :::|...|.|     ..|:.:...|.||::           .:||   ::|.|..|.|.|||.  
Human   135 HHHPSSQGGGVLQSTVSESTLIALLAARKN-----------KILEMKTSEPDADESCLNARLVAY 188

  Fly   119 ----------NALILDLIRGIGLP-----SCAG------------CFLVP--MC-----TGMTLT 149
                      .|.::.|::...||     |..|            ..|||  :|     ||:...
Human   189 ASDQAHSSVEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAF 253

  Fly   150 LCLQSL----RKRRP-----------------------------GARYVLWSRIDQKSCFKAITA 181
            .||..|    :...|                             |||..||..||     .|...
Human   254 DCLSELGPISKAHHPCSPPLSLARCETSFPTSYLPSGQVMFASSGAREGLWLHID-----AAYAG 313

  Fly   182 TG-LVPVVIPCLIKGESLNTNVDLFREKIKSLGVDSILCLYTTTSCFAPRNSDDIAEVSKLSKQW 245
            |. |.|.                 ||..:|  |::     |..:..|.|             .:|
Human   314 TAFLCPE-----------------FRGFLK--GIE-----YADSFTFNP-------------SKW 341

  Fly   246 QIPHL------VNNAYGLQAKEIVN------------------QLECANRVGRID-YFVQSS--D 283
            .:.|.      |.:.|.||....||                  |:..:.|...:. :||..|  .
Human   342 MMVHFDCTGFWVKDKYKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFGV 406

  Fly   284 KNLLVPV--GSAIVASFNESVLHD-----VASTYAG----RASGSQSL--DVLMTLLSLGRNGFR 335
            |||...|  |:.:...|...|.:|     .|..:.|    |..|...|  :||..:...||   .
Human   407 KNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVFRLKGPNCLTENVLKEIAKAGR---L 468

  Fly   336 LLFDQRGENFNYLRENLRKFAEPRGEIVIDSRFNSISLAITLATLAGDQMKSITKLGSMLHMRGV 400
            .|.....::...:|..:......|.:|:.|  :|.|..|.||........:...::|:::..  :
Human   469 FLIPATIQDKLIIRFTVTSQFTTRDDILRD--WNLIRDAATLILSQHCTSQPSPRVGNLISQ--I 529

  Fly   401 SGARVIVPGQN-KTIDGHEFLDFGSHRSNLQVPYLTVAAGIGITREE----IDKFFDIFNKCWNQ 460
            .|||....|.: :::.|... |....|..::.|.   ..|.|..:.|    ::...|..:.|:::
Human   530 RGARAWACGTSLQSVSGAGD-DPVQARKIIKQPQ---RVGAGPMKRENGLHLETLLDPVDDCFSE 590

  Fly   461 -------------IF-----QTKNEKIMSL 472
                         :|     |||.:.:.||
Human   591 EAPDATKHKLSSFLFSYLSVQTKKKTVRSL 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SecSNP_649556.3 AAT_I 12..457 CDD:302748 103/515 (20%)
HDCXP_016877583.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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