DRSC/TRiP Functional Genomics Resources

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Protein Alignment SecS and Sgpl1

DIOPT Version :9

Sequence 1:NP_649556.3 Gene:SecS / 40681 FlyBaseID:FBgn0037347 Length:478 Species:Drosophila melanogaster
Sequence 2:XP_008771093.2 Gene:Sgpl1 / 286896 RGDID:628599 Length:648 Species:Rattus norvegicus


Alignment Length:452 Identity:90/452 - (19%)
Similarity:147/452 - (32%) Gaps:158/452 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LGLAAQRSKQRSFKELLEK-----------RKLPKNGWSDERIEELVHMLASLDSNNYPHKVGLG 73
            :|...|:...::.|:|::.           :.||..|.|...:.|.:...:|:|       |...
  Rat   164 IGRKIQQQLTKAKKDLVKNMPFLKLDKDYVKTLPAQGLSTAEVLERLKEYSSMD-------VFWQ 221

  Fly    74 EREARIACKLVARRHYNFGHGIGRSGDLLEAQPKAAGSTLLARL------TNALILDLIRGI--- 129
            |.:|                    ||.:...:||.  :.||.:.      :|.|..|:..|:   
  Rat   222 EGKA--------------------SGAVYSGEPKL--TELLVQAYGEFTWSNPLHPDIFPGLRKL 264

  Fly   130 -------------GLPSCAGCFLVPMCTGMTLTLCLQSLRKRRPGARYVLWSRIDQKSCFKAITA 181
                         |.|...||    :.:|.|.::.:                     :| ||...
  Rat   265 EAEIVRMTCSLFNGGPDSCGC----VTSGGTESILM---------------------AC-KAYRD 303

  Fly   182 TGLVP-VVIPCLIKGESLNTNVD----LFREKI------KSLGVDSILCLYTTTS-------CFA 228
            ..|.. :..|.::..||.:...|    .|..||      |::.|| :..:....|       |.|
  Rat   304 LALEKGIKTPEIVAPESAHAAFDKAAHYFGMKIVRVAQKKNMEVD-VRAMKRAISRNTAMLVCSA 367

  Fly   229 PRNS----DDIAEVSKLSKQWQIPHLVNNAYGLQAKEIVNQLECAN---------RVGRIDYFVQ 280
            |:..    |.|.||:||:.:::||..|:...|   ..::..:|.|.         ||..:.....
  Rat   368 PQFPHGVIDPIPEVAKLAVKYKIPFHVDACLG---GFLIVFMEKAGYPLEKPFDFRVKGVTSISA 429

  Fly   281 SSDKNLLVPVGSAIVASFNES-------VLHD------VASTYAGRASGSQSLDVLMTLLSLGRN 332
            .:.|....|.||::|...||.       |..|      .:.:.||...|.........|:..|.|
  Rat   430 DTHKYGYAPKGSSVVMYSNEKYRKYQFFVDADWQGGIYASPSIAGSRPGGIIAACWAALMHFGEN 494

  Fly   333 GFRLLFDQRGENFNYLRENLRKFAEPRGEIVIDSRFNSISLA-ITLATLAGDQMKSITKLGS 393
            |                     :.|...:|:..:||....|. |....:.||...|:..|||
  Rat   495 G---------------------YVEATKQIIKTARFLKSELENIKNIFILGDPQLSVIALGS 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SecSNP_649556.3 AAT_I 12..457 CDD:302748 90/452 (20%)
Sgpl1XP_008771093.2 DOPA_deC_like 226..587 CDD:99743 76/363 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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