DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SecS and GAD2

DIOPT Version :10

Sequence 1:NP_649556.3 Gene:SecS / 40681 FlyBaseID:FBgn0037347 Length:478 Species:Drosophila melanogaster
Sequence 2:NP_000809.1 Gene:GAD2 / 2572 HGNCID:4093 Length:585 Species:Homo sapiens


Alignment Length:336 Identity:57/336 - (16%)
Similarity:124/336 - (36%) Gaps:91/336 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 ARYVLWSRIDQK------------------SCFKAITATGL---VPVVIPCLIKGESLNTNVDLF 205
            ||:.::..:.:|                  |..|...|.|:   ..::|.|..:|:.:.::::..
Human   254 ARFKMFPEVKEKGMAALPRLIAFTSEHSHFSLKKGAAALGIGTDSVILIKCDERGKMIPSDLERR 318

  Fly   206 REKIKSLGVDSILCLYTT-TSCFAPRNSDDIAEVSKLSKQWQIPHLVNNAYG---LQAKEIVNQL 266
            ..:.|..|....|...|. |:.:..  .|.:..|:.:.|:::|...|:.|:|   |.:::...:|
Human   319 ILEAKQKGFVPFLVSATAGTTVYGA--FDPLLAVADICKKYKIWMHVDAAWGGGLLMSRKHKWKL 381

  Fly   267 ECANRVGRIDYFVQSSDKNLLVPVGSAIVASFNESVLHDVASTYAG------------------- 312
            ....|...:.:   :..|.:.||:..:.:....|.::.:....:|.                   
Human   382 SGVERANSVTW---NPHKMMGVPLQCSALLVREEGLMQNCNQMHASYLFQQDKHYDLSYDTGDKA 443

  Fly   313 ----------------RASGS--------QSLDVLMTLLSL--GRNGFRLLFDQRGENFN----Y 347
                            ||.|:        :.|::...|.::  .|.|:.::||.:.::.|    |
Human   444 LQCGRHVDVFKLWLMWRAKGTTGFEAHVDKCLELAEYLYNIIKNREGYEMVFDGKPQHTNVCFWY 508

  Fly   348 LRENLRKFAEPRGEIVIDSRFNSISLAITLATLA-GDQMKSITKLGSMLHMRGVSGARVIVPGQN 411
            :..:||...:....:   ||.:.::..|....:. |..|.|...||..     |:..|:::....
Human   509 IPPSLRTLEDNEERM---SRLSKVAPVIKARMMEYGTTMVSYQPLGDK-----VNFFRMVISNPA 565

  Fly   412 KTIDGHEFLDF 422
            .|   |:.:||
Human   566 AT---HQDIDF 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SecSNP_649556.3 AAT_I 12..457 CDD:450240 57/336 (17%)
GAD2NP_000809.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
Pyridoxal_deC 138..509 CDD:395219 40/259 (15%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.