DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SecS and Tdc2

DIOPT Version :9

Sequence 1:NP_649556.3 Gene:SecS / 40681 FlyBaseID:FBgn0037347 Length:478 Species:Drosophila melanogaster
Sequence 2:NP_724489.1 Gene:Tdc2 / 246620 FlyBaseID:FBgn0050446 Length:637 Species:Drosophila melanogaster


Alignment Length:453 Identity:99/453 - (21%)
Similarity:166/453 - (36%) Gaps:146/453 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 GHGIGRSGDLLEAQPKAAGSTLLARLTNALILD-LIRGIGLP------------------SCAGC 137
            |.|||..|....|.|....       ...::|| |.:.||||                  |.:.|
  Fly    95 GDGIGCIGFSWAASPACTE-------LETIVLDWLGKAIGLPDHFLALKEGSTGGGVIQTSASEC 152

  Fly   138 FLVPMCTGMTLTLCLQSLRKRRPGARYV----LWSRI------DQKSCFKAITATGLVPVVIPCL 192
            .||.|     |....|:|::.:....:|    |.|::      :..||.:        ...:.|.
  Fly   153 VLVTM-----LAARAQALKRLKAQHPFVEEGHLLSKLMAYCSKEAHSCVE--------KAAMICF 204

  Fly   193 IKGESLNTNVD--LFREKI-KSLGVDSI---------LCLYTTTSCFAPRNSDDIAEVSKLSKQW 245
            :|...|..:.|  |..:.| :::..|.:         ..|.||.||    ..|::.|:.|..:::
  Fly   205 VKLRILEPDDDASLRGQTIYEAMEEDELQGLVPFFVSTTLGTTGSC----AFDNLPEIGKQLQRF 265

  Fly   246 QIPHL-VNNAYG------LQAKEIVNQLECANRVGRIDYFVQSSDKNLL-------------VPV 290
            ....| |:.||.      .:.|.::..:|.|      |.|..:.:|.||             :.:
  Fly   266 PGVWLHVDAAYAGNSFICPELKPLLKGIEYA------DSFNTNPNKWLLTNFDCSTLWVRDRIRL 324

  Fly   291 GSAIVAS--FNESVLHDVASTYAGRASG------SQSLDVLMTLLSLGRNGFRLLFDQRGENFNY 347
            .||:|..  :.:....|.|..|  |..|      .:||.:...|.|.|.:|.:          :|
  Fly   325 TSALVVDPLYLKHGYSDAAIDY--RHWGVPLSRRFRSLKLWFVLRSYGISGLQ----------HY 377

  Fly   348 LRENLRKFAEPRGEIVI-DSRF---NSISLAITLATLAG-----DQMKSITKLGSMLHMRGVS-G 402
            :|.:: |.|:...|:|: |.||   |.:.|.:....|.|     :::.||......|||...| |
  Fly   378 IRHHI-KLAKRFEELVLKDKRFEICNQVKLGLVCFRLKGSDKLNEKLLSIINESGKLHMVPASVG 441

  Fly   403 ARVIV----PGQNKTIDGHEF-----LDFGSHRSNLQVPYLTVAAGIGITREEIDKFFDIFNK 456
            .|.|:    ..||.|.:..::     :||.:..               :.:|:.|:..:|.|:
  Fly   442 DRYIIRFCAVAQNATAEDIDYAWDIIVDFANEL---------------LEKEQHDELSEIMNR 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SecSNP_649556.3 AAT_I 12..457 CDD:302748 99/453 (22%)
Tdc2NP_724489.1 Pyridoxal_deC 35..414 CDD:278699 79/361 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.