DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SecS and Sgpl1

DIOPT Version :9

Sequence 1:NP_649556.3 Gene:SecS / 40681 FlyBaseID:FBgn0037347 Length:478 Species:Drosophila melanogaster
Sequence 2:NP_001303602.1 Gene:Sgpl1 / 20397 MGIID:1261415 Length:568 Species:Mus musculus


Alignment Length:525 Identity:103/525 - (19%)
Similarity:167/525 - (31%) Gaps:206/525 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FEQVNIPEKLVPDNYLQLGLAAQRSKQRSFKELLEKRKLPKNGWSDERIEELVHMLASLDSNNYP 67
            :|.:..||.|           ..|.|::.||.:   ||:|..|   .:||:.|.........|.|
Mouse    57 YELIFQPESL-----------WSRFKKKLFKLI---RKMPFIG---RKIEQQVSKAKKDLVKNMP 104

  Fly    68 H-KV-----------GLGEREARIACKLVARRHYNFGHGIGR----SGDLLEAQPKAAGSTLLAR 116
            . ||           |:|..|.     |...:.|:...|..:    ||.:...:||.  :.||.:
Mouse   105 FLKVDKDYVKTLPAQGMGTAEV-----LERLKEYSSMDGSWQEGKASGAVYNGEPKL--TELLVQ 162

  Fly   117 L------TNALILDLIRGI----------------GLPSCAGCFLVPMCTGMTLTLCLQSLRKRR 159
            .      :|.|..|:..|:                |.|...||    :.:|.|.::.:       
Mouse   163 AYGEFTWSNPLHPDIFPGLRKLEAEIVRMTCSLFNGGPDSCGC----VTSGGTESILM------- 216

  Fly   160 PGARYVLWSRIDQKSCFKAITATGLVP-VVIPCLIKGESLNTNVD----LFREKI------KSLG 213
                          :| ||.....|.. :..|.::..||.:...|    .|..||      |::.
Mouse   217 --------------AC-KAYRDLALEKGIKTPEIVAPESAHAAFDKAAHYFGMKIVRVALKKNME 266

  Fly   214 VD----------SILCLYTTTSCFAPRNSDDIAEVSKLSKQWQIPHLVNNAYGLQAKEIVNQLEC 268
            ||          :...|..:|..|.....|.:.||:||:.:::||..|:...|   ..::..:|.
Mouse   267 VDVQAMKRAISRNTAMLVCSTPQFPHGVMDPVPEVAKLAVRYKIPLHVDACLG---GFLIVFMEK 328

  Fly   269 AN---------RVGRIDYFVQSSDKNLLVPVGSAIVASFNE---SVLHDVASTYAGRASGSQSL- 320
            |.         ||..:......:.|....|.||::|...||   :....|.:.:.|....|.|: 
Mouse   329 AGYPLEKPFDFRVKGVTSISADTHKYGYAPKGSSVVMYSNEKYRTYQFFVGADWQGGVYASPSIA 393

  Fly   321 ---------------------------------------------------DVLMTLLSLGRNGF 334
                                                               |..:::::||.|.|
Mouse   394 GSRPGGIIAACWAALMHFGENGYVEATKQIIKTARFLKSELENIKNIFIFGDPQLSVIALGSNDF 458

  Fly   335 RL-----LFDQRGENFNYLRENLRKFAEPRGEIVIDSRFNSISLAITLA--------TLAGDQMK 386
            .:     :...:|.|||||:       .||          ||...|||.        ....|..:
Mouse   459 DIYRLSNMMSAKGWNFNYLQ-------FPR----------SIHFCITLVHTRKRVAIQFLKDIRE 506

  Fly   387 SITKL 391
            |:|::
Mouse   507 SVTQI 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SecSNP_649556.3 AAT_I 12..457 CDD:302748 100/516 (19%)
Sgpl1NP_001303602.1 DOPA_deC_like 146..507 CDD:99743 76/408 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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