DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SecS and spl-2

DIOPT Version :9

Sequence 1:NP_649556.3 Gene:SecS / 40681 FlyBaseID:FBgn0037347 Length:478 Species:Drosophila melanogaster
Sequence 2:NP_505372.1 Gene:spl-2 / 181859 WormBaseID:WBGene00006418 Length:542 Species:Caenorhabditis elegans


Alignment Length:332 Identity:61/332 - (18%)
Similarity:114/332 - (34%) Gaps:107/332 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 DQKSCFKAITATGLVPVVIPCLI-------KGESLNTNV-------------DLFREKIKSLGVD 215
            |.::| ..::..|.:.:::.||.       :||.....:             :.||.|::.:.||
 Worm   187 DSETC-GTMSTGGSISILLACLAHRNRLLKRGEKYTEMIVPSSVHAAFFKAAECFRIKVRKIPVD 250

  Fly   216 SI----------------LCLYTTTSCFAPRNS-DDIAEVSKLSKQWQIPHLVNNAYG------L 257
            .:                .|:...::...|..: |||..:.:|..::.||..|:...|      |
 Worm   251 PVTFKVDLVKMKAAINKRTCMLVGSAPNFPFGTVDDIEAIGQLGLEYDIPVHVDACLGGFLLPFL 315

  Fly   258 QAKEIVNQLECANRVGRIDYFVQSSDKNLLVPVGSAIVASFNESVLHD-------------VAST 309
            :..||....    ||..:......|.|..|.|.||::|...|:.:||:             .::|
 Worm   316 EEDEIRYDF----RVPGVSSISADSHKYGLAPKGSSVVLYRNKELLHNQYFCDADWQGGIYASAT 376

  Fly   310 YAGRASGSQSLDVLMTLLSLGRNGFRLLFDQRGENFNYLRENLRKFAEPRGEIVIDSRFNSISLA 374
            ..|..:|.........:|...:.|:              :.|.||..:...:|     .|.:|  
 Worm   377 MEGSRAGHNIALCWAAMLYHAQEGY--------------KANARKIVDTTRKI-----RNGLS-- 420

  Fly   375 ITLATLAGDQMKSITKLGSMLHMRGVSGARVIVPGQNKTIDGHEFLDFGSHR----SNLQVPYLT 435
                     .:|.|       .::|.|...::....|..::.:.|.:|...:    :.||.|   
 Worm   421 ---------NIKGI-------KLQGPSDVCIVSWTTNDGVELYRFHNFMKEKHWQLNGLQFP--- 466

  Fly   436 VAAGIGI 442
              ||:.|
 Worm   467 --AGVHI 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SecSNP_649556.3 AAT_I 12..457 CDD:302748 61/332 (18%)
spl-2NP_505372.1 DOPA_deC_like 130..493 CDD:99743 61/332 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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