Protein Alignment SecS and secs-1

DIOPT Version :10

• Sequence 1: NP_649556.3
• Gene: SecS / 40681
• FlyBaseID: FBgn0037347
• Length: 478
• Species: Drosophila melanogaster
• Sequence 2: NP_001129887.1
• Gene: secs-1 / 179498
• WormBaseID: WBGene00008379
• Length: 523
• Species: Caenorhabditis elegans
• Alignment Length: 431
• Identity: 183/431 - (42%)
• Similarity: 273/431 - (63%)
• Gaps: 11/431 - (2%)

  Fly    26 RSKQRSFKELLEKRKLPKNGWSDERIEELVHMLASLDSNN----YPHKVGLGEREARIACKLVAR 86
            :|..:....|.||:::|:.|||:..::..:..|:|.|:||    .|  ||.||||.|:...||.|
 Worm    60 KSSNKLLNSLWEKKQIPEEGWSEHTLDLFLSWLSSHDTNNRVDMIP--VGAGEREGRVLTPLVQR 122

  Fly    87 RHYNFGHGIGRSGDLLEAQPKAAGSTLLARLTNALILDLIRGIGLPSCAGCFLVPMCTGMTLTLC 151
            .|.|..|||||||:|||.||||.||::||.|:|......:..:||.:...|.:||:||||:|:||
 Worm   123 LHSNLTHGIGRSGNLLEIQPKALGSSMLACLSNEFAKHALHLLGLHAVKSCIVVPLCTGMSLSLC 187

  Fly   152 LQSLRKRRPGARYVLWSRIDQKSCFKAITATGLVPVVIPCLIKGESLNTNVDLFREKIKSLGVDS 216
            :.|.|:|||.|:||:|.||||||..|:|...|..|:::..:...:||.|:|:.....|:..| :.
 Worm   188 MTSWRRRRPKAKYVVWLRIDQKSSLKSIYHAGFEPIIVEPIRDRDSLITDVETVNRIIEQRG-EE 251

  Fly   217 ILCLYTTTSCFAPRNSDDIAEVSKLSKQWQIPHLVNNAYGLQAKEIVNQLECANRVGRIDYFVQS 281
            |||:.|||||||||:.|::..:|.:.....:|||||||||||::|.:.::..|:..||:|..|||
 Worm   252 ILCVMTTTSCFAPRSPDNVEAISAICAAHDVPHLVNNAYGLQSEETIRKIAAAHECGRVDAVVQS 316

  Fly   282 SDKNLLVPVGSAIVASFNESVLHDVASTYAGRASGSQSLDVLMTLLSLGRNGFRLLFDQRGENFN 346
            .|||..||||.|::|:|.::.:..:|.:|.||||...|.|:::|||..|::.|...|.::.:.|.
 Worm   317 LDKNFQVPVGGAVIAAFKQNHIQSIAQSYPGRASSVPSRDLVLTLLYQGQSAFLEPFGKQKQMFL 381

  Fly   347 YLRENLRKFAEPRGEIVIDSRFNSISLAITLATLAGDQMKSITKLGSMLHMRGVSGARVIVPGQN 411
            .:|..|..|||..||.|.:...|.||.|:||:|:...:.   |..||:|..:|::||||:...|:
 Worm   382 KMRRKLISFAENIGECVYEVPENEISSAMTLSTIPPAKQ---TLFGSILFAKGITGARVVTSSQS 443

  Fly   412 K-TIDGHEFLDFGSHRSNLQVPYLTVAAGIGITREEIDKFF 451
            | ||:|.||::||||.:.....||.:|..:|:|..|:::.|
 Worm   444 KTTIEGCEFINFGSHTTEQHGGYLNIACSVGMTDHELEELF 484

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SecS	NP_649556.3	AAT_I	12..457	CDD:450240	183/431 (42%)
secs-1	NP_001129887.1	selenium_SpcS	46..491	CDD:211833	183/431 (42%)