DRSC/TRiP Functional Genomics Resources

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Protein Alignment SecS and Tdc1

DIOPT Version :10

Sequence 1:NP_649556.3 Gene:SecS / 40681 FlyBaseID:FBgn0037347 Length:478 Species:Drosophila melanogaster
Sequence 2:XP_061508922.1 Gene:Tdc1 / 1269867 VectorBaseID:AGAMI1_011532 Length:578 Species:Anopheles gambiae


Alignment Length:328 Identity:68/328 - (20%)
Similarity:111/328 - (33%) Gaps:111/328 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SKQRSFKELLEKRKLPKNGWSDERIEELVHMLASLDSNNYPHKVGLGEREARIACKLVA------ 85
            ::.|:.|||       |....|      ||     ||...|..|....:||..:.:..|      
Mosquito   160 ARARAIKEL-------KGNHHD------VH-----DSVYLPQLVAYSSKEAHSSIEKAAKMAIVK 206

  Fly    86 -RRHYNFGHGIGRSGDLLEAQPKAAGSTLLARLTNALILDLIRGIGLPSCAGCFLVPMCTGMTLT 149
             |.......|:.| ||.|.               .|:..||.:|:     ..||:|  .|..|.:
Mosquito   207 LRALDTDSRGVFR-GDTLR---------------QAIQEDLAQGL-----TPCFVV--ATVGTTS 248

  Fly   150 LCL--------QSLRKRRPGARYVLWSRIDQKSCFKAITATGLVPVVIPCLIK-------GESLN 199
            .|:        |..|:.|.     :|..:|......:.        ::|.:.:       .:|.|
Mosquito   249 ACVFDNLVEIGQVCREVRS-----IWFHVDGAYAGNSF--------ILPEMRRFKEGLEYADSFN 300

  Fly   200 TNVD-----------LFREKIK----SLGVDSILCLYTTTSCFAPRN-SDDIAEVSKLSKQWQIP 248
            ||.:           ::.:.:|    :|.||.:...:..:|....|: ...::...:..|.|   
Mosquito   301 TNPNKLLLTNFDCSAMWVKDVKLLTTALAVDPLYLQHEHSSAIDYRHYGIPLSRRFRALKLW--- 362

  Fly   249 HLVNNAYGLQA--KEIVNQLECANR----VGRIDYFVQSSDKNL-LV--------PVGSAIVASF 298
             .|..:||:..  |.|.|.:..|.|    |...|.|...:|.|| ||        .:...::|..
Mosquito   363 -FVFRSYGIVGLQKYIRNHIALAKRFETLVNSDDRFEVRNDVNLGLVCFRLKQQDRINRDLLARI 426

  Fly   299 NES 301
            |:|
Mosquito   427 NQS 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SecSNP_649556.3 AAT_I 12..457 CDD:450240 68/328 (21%)
Tdc1XP_061508922.1 None

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