DRSC/TRiP Functional Genomics Resources

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Protein Alignment SecS and gad3

DIOPT Version :9

Sequence 1:NP_649556.3 Gene:SecS / 40681 FlyBaseID:FBgn0037347 Length:478 Species:Drosophila melanogaster
Sequence 2:NP_001083039.2 Gene:gad3 / 100038790 ZFINID:ZDB-GENE-070424-80 Length:546 Species:Danio rerio


Alignment Length:68 Identity:19/68 - (27%)
Similarity:29/68 - (42%) Gaps:14/68 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   327 LSLGRNGFRLLFDQRGENFNYL----RENLR---KFAEPRGEIVIDSRFNSISLAITLATLAGDQ 384
            |:.|..||.|....:.:|...|    |:.|:   |...||       .||.:|..:.:..|||:.
Zfish    99 LNEGLEGFSLELPDQPDNLEQLLVDCRDTLKYGVKTGHPR-------FFNQLSTGLDIVGLAGEW 156

  Fly   385 MKS 387
            :.|
Zfish   157 LTS 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SecSNP_649556.3 AAT_I 12..457 CDD:302748 19/68 (28%)
gad3NP_001083039.2 Pyridoxal_deC 96..469 CDD:278699 19/68 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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