DRSC/TRiP Functional Genomics Resources

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Protein Alignment SecS and sgpl1

DIOPT Version :10

Sequence 1:NP_649556.3 Gene:SecS / 40681 FlyBaseID:FBgn0037347 Length:478 Species:Drosophila melanogaster
Sequence 2:XP_005156777.1 Gene:sgpl1 / 100037312 ZFINID:ZDB-GENE-070410-24 Length:574 Species:Danio rerio


Alignment Length:433 Identity:92/433 - (21%)
Similarity:157/433 - (36%) Gaps:140/433 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KLVPDNYLQLGLAAQR--SKQRSFKELLE----KRKLPKNG---WSDERIEE-LVHMLASLDSNN 65
            ||:|..    ||..::  .|.|.::.|.|    |.|:  :|   |.||::.: ||.:.......|
Zfish   111 KLLPAQ----GLTHKQLLDKIREYETLSEVNWAKGKV--SGAVYWGDEKLTDLLVKVYGEFAWTN 169

  Fly    66 YPHK---VGLGEREA---RIACKLVARRHYNFGHGIGRSGDLLEAQPKAAGSTLLARLTNALIL- 123
            ..|.   .|:.:.||   |:.|.|     :|.|             |.:.| |:.:..|.:::: 
Zfish   170 PLHPDIFPGVRKMEAEVVRMTCAL-----FNGG-------------PDSCG-TVTSGGTESILMA 215

  Fly   124 -----DLI--RGIGLPSCAGCFLVPMCTGMTLTLCLQSLRKRRPGARYVLWSRIDQKSCF-KAIT 180
                 |:.  |||..|.    .:.|                            |...:.| ||..
Zfish   216 CKAYRDMAHERGIKHPE----IIAP----------------------------ISVHAAFDKAAH 248

  Fly   181 ATGLVPVVIPCLIKGESLNTNVDLFREKI-KSLGVDSILCLYTTTSCFAPR----NSDDIAEVSK 240
            ..|:..:.:|  :..:::..:|...|..| |:..:         ..|.||:    ..|.:.||:|
Zfish   249 YFGMKLIHVP--LDNKTMKVDVKAMRRAITKNTAM---------LVCSAPQFPHGIMDPVEEVAK 302

  Fly   241 LSKQWQIPHLVNNAYGLQAKEIVNQLECANRVGRIDYFVQ-----SSD--KNLLVPVGSAIVASF 298
            |:.::.||..|:...|  ...||...:...::...|:.|:     |:|  |....|.||::|...
Zfish   303 LAVKYNIPFHVDACLG--GFLIVFMEKAGFKLAPFDFRVKGVTSISADTHKYGYAPKGSSVVLYS 365

  Fly   299 NESVLH---DVASTYAG------RASGSQSLDVL----MTLLSLGRNGFRLLFDQRGENFNYLRE 350
            |....|   .||..:.|      ..:||:...::    .|::.:|..|:.....:..|....::.
Zfish   366 NRKFRHYQYFVAPDWQGGIYASPSMAGSRPGGIIAACWATMMHMGEKGYVEATRKVVETTRKIKT 430

  Fly   351 NLRKFAEPRGEIVIDSRFNSISLAITLATLAGDQMKSITKLGS 393
            .:||         ||..|           :.||...|:..|||
Zfish   431 GIRK---------IDGVF-----------VFGDPEVSVVALGS 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SecSNP_649556.3 AAT_I 12..457 CDD:450240 91/432 (21%)
sgpl1XP_005156777.1 DOPA_deC_like 143..504 CDD:99743 81/397 (20%)

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