DRSC/TRiP Functional Genomics Resources

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Protein Alignment kra and TIF5

DIOPT Version :9

Sequence 1:NP_524238.1 Gene:kra / 40680 FlyBaseID:FBgn0250753 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_015366.1 Gene:TIF5 / 856154 SGDID:S000006245 Length:405 Species:Saccharomyces cerevisiae


Alignment Length:443 Identity:93/443 - (20%)
Similarity:148/443 - (33%) Gaps:149/443 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 SISQDGEKPRTSYCIFDAPESMESMRNHEQVFV--------KLIRRYKYLEKMFEEEMGKVLLFV 140
            :|.:|...|...|.:......:|...|..:..|        .|.|...|:.|.|..|:|      
Yeast     4 NICRDNHDPFYRYKMPPIQAKVEGRGNGIKTAVLNVADISHALNRPAPYIVKYFGFELG------ 62

  Fly   141 KGFTPSERIKLARMTAL------WLVNGSVPPNVLLVLNNEHLIKDGIALEFLL---------EL 190
                        ..|::      :||||...|..|      ..:.||...:|:|         |:
Yeast    63 ------------AQTSISVDKDRYLVNGVHEPAKL------QDVLDGFINKFVLCGSCKNPETEI 109

  Fly   191 FQTFKQEKGIAYLIQALKKGG------LESKLMDFF---PPNKRTEEYFKQVFLDKELNEIVKLH 246
            ..|...:     |::..|..|      |..||..|.   ||:..:....|:.......|  |:..
Yeast   110 IITKDND-----LVRDCKACGKRTPMDLRHKLSSFILKNPPDSVSGSKKKKKAATASAN--VRGG 167

  Fly   247 KAQASQEAKRELQQALIDDINDEKPY------NEITSDIKDFSQRTNIPDHEIIVIIWSTIMS-- 303
            ....|..|:.:.|.|..|......|.      :|::..||  :..:.:.|.|:....|:..||  
Yeast   168 GLSISDIAQGKSQNAPSDGTGSSTPQHHDEDEDELSRQIK--AAASTLEDIEVKDDEWAVDMSEE 230

  Fly   304 --------------------LGEW------NKKEELVTD----------QAVRHLKNYCPLLQAF 332
                                .|||      ..||.|.:|          ..:...|..|.|.|..
Yeast   231 AIRARAKELEVNSELTQLDEYGEWILEQAGEDKENLPSDVELYKKAAELDVLNDPKIGCVLAQCL 295

  Fly   333 ASTD-RSELA-------LILKVQEFCYENMNFMKAFQ---------------KIILLFYKTEVLS 374
            ...| .:|:|       .||...|  ||. |||...:               ||::..|..:::|
Yeast   296 FDEDIVNEIAEHNAFFTKILVTPE--YEK-NFMGGIERFLGLEHKDLIPLLPKILVQLYNNDIIS 357

  Fly   375 EEIILRWYKEGHSNKGKMHFL-----EQMRK----FVEWLQSAEEESESEDEQ 418
            ||.|:|:     ..|....|:     :::|:    |:.||::||.:.:.||::
Yeast   358 EEEIMRF-----GTKSSKKFVPKEVSKKVRRAAKPFITWLETAESDDDEEDDE 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kraNP_524238.1 W2_eIF5C_like 218..406 CDD:211398 55/266 (21%)
TIF5NP_015366.1 eIF-5_eIF-2B 8..127 CDD:396445 29/147 (20%)
W2_eIF5 242..392 CDD:211399 34/157 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1073
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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