DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha26 and VHA-E3

DIOPT Version :10

Sequence 1:NP_524237.1 Gene:Vha26 / 40679 FlyBaseID:FBgn0283535 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_176602.1 Gene:VHA-E3 / 842725 AraportID:AT1G64200 Length:237 Species:Arabidopsis thaliana


Alignment Length:234 Identity:99/234 - (42%)
Similarity:156/234 - (66%) Gaps:19/234 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQQQRLKIMEYYEKKEKQVELQ 67
            ::|||...||:.|:.||.|||.|||.||...:||||||||.:||:.::.||.:.||||||||:::
plant     1 MNDADASIQIQQMVRFIRQEAEEKANEISISSEEEFNIEKLQLVEAEKKKIRQEYEKKEKQVDVR 65

  Fly    68 KKIQSSNMLNQARLKVLKVREDHVSSVLDDARKRLGEVTK------NQSEYETVLTKLIVQGLFQ 126
            |||..|..||.:|:|||:.::|.|:::.::|.|:|.:|::      :..:|:.:|..||||.|.:
plant    66 KKIDYSMQLNASRIKVLQAQDDIVNAMKEEAAKQLLKVSQHGFFNHHHHQYKHLLKDLIVQCLLR 130

  Fly   127 IMEPKVILRCREVDVPLVRNVLPAAVEQY--KAQINQNVELFIDEKDFL---------SADTC-G 179
            :.||.|:|||||.|:.:|.::|..|.|:|  ||:::. .|:.:|:..||         .|.:| |
plant   131 LKEPAVLLRCREEDLDIVESMLDDASEEYCKKAKVHA-PEIIVDKDIFLPPAPSDDDPHALSCAG 194

  Fly   180 GVELLALNGRIKVPNTLESRLDLISQQLVPEIRNALFGR 218
            ||.|.:.:|:|...|||::||::..:..:||||.:|||:
plant   195 GVVLASRDGKIVCENTLDARLEVAFRNKLPEIRKSLFGK 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha26NP_524237.1 vATP-synt_E 18..216 CDD:396537 90/215 (42%)
VHA-E3NP_176602.1 vATP-synt_E 16..231 CDD:396537 90/215 (42%)

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