DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vha26 and vma4

DIOPT Version :9

Sequence 1:NP_001287182.1 Gene:Vha26 / 40679 FlyBaseID:FBgn0283535 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_594932.1 Gene:vma4 / 2543000 PomBaseID:SPAC11E3.07 Length:227 Species:Schizosaccharomyces pombe


Alignment Length:226 Identity:85/226 - (37%)
Similarity:142/226 - (62%) Gaps:3/226 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQQQRLKIMEYYEKKEKQVE 65
            |:|||..||.::..|::||:|||.|||:||...:||||.:||.::|::|...|.:.|:.|.|:..
pombe     1 MSLSDEQVQAEMHKMVSFIKQEALEKAKEIHTLSEEEFQVEKAKIVREQCDAIDQTYDMKLKRAS 65

  Fly    66 LQKKIQSSNMLNQARLKVLKVREDHVSSVLDDARKRLGEVTKNQSEYETVLTKLIVQGLFQIMEP 130
            :.:||..||:||::||::|..::..:..:.....|:|..:.:.:..|...:..||||.:..:.||
pombe    66 MAQKIAKSNVLNKSRLEILNSKQKVIDDIFSRVEKKLDGIEQKKDAYTKFMADLIVQAMELLGEP 130

  Fly   131 KVILRCREVDVPLVRNVLPAAVEQYKAQINQNVELFIDEK--DFLSADTCGGVELLALNGRIKVP 193
            ..|:..|:.|..:|:..:|.|.|..|:: |.:::..:|.:  |||:....|||.|:.|.|:|:|.
pombe   131 VGIVYSRQRDAEIVKAAIPKATEVLKSK-NGSIDYELDAETDDFLNDSVLGGVVLVGLGGKIRVD 194

  Fly   194 NTLESRLDLISQQLVPEIRNALFGRNVNRKF 224
            |||.:||:::.::.:||||..|||.|.||||
pombe   195 NTLRARLEIVKEEALPEIRRLLFGENPNRKF 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha26NP_001287182.1 NtpE 9..217 CDD:224308 73/209 (35%)
vATP-synt_E 18..216 CDD:280215 70/199 (35%)
vma4NP_594932.1 NtpE 9..219 CDD:224308 74/210 (35%)
vATP-synt_E 18..217 CDD:280215 70/199 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 135 1.000 Domainoid score I1272
eggNOG 1 0.900 - - E1_COG1390
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1282
Inparanoid 1 1.050 161 1.000 Inparanoid score I1242
OMA 1 1.010 - - QHG53684
OrthoFinder 1 1.000 - - FOG0002151
OrthoInspector 1 1.000 - - oto101863
orthoMCL 1 0.900 - - OOG6_101237
Panther 1 1.100 - - LDO PTHR45715
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1632
SonicParanoid 1 1.000 - - X1613
TreeFam 1 0.960 - -
1413.860

Return to query results.
Submit another query.