DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha26 and vha-8

DIOPT Version :9

Sequence 1:NP_001287182.1 Gene:Vha26 / 40679 FlyBaseID:FBgn0283535 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_501040.1 Gene:vha-8 / 177442 WormBaseID:WBGene00006917 Length:226 Species:Caenorhabditis elegans


Alignment Length:226 Identity:133/226 - (58%)
Similarity:177/226 - (78%) Gaps:0/226 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQQQRLKIMEYYEKKEKQVE 65
            |.:||.|||||::|||||||||||||||||||||||||||||||||||||.||||::||||||||
 Worm     1 MGISDNDVQKQLRHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQQQRQKIMEFFEKKEKQVE 65

  Fly    66 LQKKIQSSNMLNQARLKVLKVREDHVSSVLDDARKRLGEVTKNQSEYETVLTKLIVQGLFQIMEP 130
            ||:|||:||.||..||:.||.||||:.:|||:||..|..::.:.:.|..:|..|::|||.|::|.
 Worm    66 LQRKIQASNSLNAGRLRCLKAREDHIGAVLDEARSNLSRISGDAARYPAILKGLVMQGLLQLLEK 130

  Fly   131 KVILRCREVDVPLVRNVLPAAVEQYKAQINQNVELFIDEKDFLSADTCGGVELLALNGRIKVPNT 195
            :|:|||||.|:.||..:||..::..:.:.....::.:|:::||.:::.|||||.|..|:|||.:|
 Worm   131 EVVLRCREKDLRLVEQLLPECLDGLQKEWGSTTKVVLDKQNFLPSESAGGVELSARAGKIKVSST 195

  Fly   196 LESRLDLISQQLVPEIRNALFGRNVNRKFTD 226
            |||||:||:.|:||::|.||||.|.||.|.|
 Worm   196 LESRLELIANQIVPQVRTALFGPNPNRSFFD 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha26NP_001287182.1 NtpE 9..217 CDD:224308 121/207 (58%)
vATP-synt_E 18..216 CDD:280215 113/197 (57%)
vha-8NP_501040.1 NtpE 9..218 CDD:224308 122/208 (59%)
vATP-synt_E 18..216 CDD:280215 113/197 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160069
Domainoid 1 1.000 235 1.000 Domainoid score I1326
eggNOG 1 0.900 - - E1_COG1390
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1282
Inparanoid 1 1.050 272 1.000 Inparanoid score I1815
Isobase 1 0.950 - 0 Normalized mean entropy S881
OMA 1 1.010 - - QHG53684
OrthoDB 1 1.010 - - D1489718at2759
OrthoFinder 1 1.000 - - FOG0002151
OrthoInspector 1 1.000 - - oto17678
orthoMCL 1 0.900 - - OOG6_101237
Panther 1 1.100 - - LDO PTHR45715
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1632
SonicParanoid 1 1.000 - - X1613
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1615.790

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