DRSC/TRiP Functional Genomics Resources

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Protein Alignment noi and PRP9

DIOPT Version :9

Sequence 1:NP_477114.1 Gene:noi / 40678 FlyBaseID:FBgn0014366 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_010254.1 Gene:PRP9 / 851531 SGDID:S000002188 Length:530 Species:Saccharomyces cerevisiae


Alignment Length:589 Identity:142/589 - (24%)
Similarity:242/589 - (41%) Gaps:150/589 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLEQQRRLHEERERLVKLMVDEHATKKP-------GEKERIHSEHRL------------------ 43
            |||.:|.|.||.| :::..:.|...:.|       .|..::..:.:|                  
Yeast     3 LLETRRSLLEEME-IIENAIAERIQRNPELYYHYIQESSKVFPDTKLPRSSLIAENKIYKFKKVK 66

  Fly    44 ---KYLMELHHNSTSQLRDLYEDKDNERKAEIAALSGPNEFNE-------FYARLKQIKQFYKSH 98
               |.::...|.....|||..|.:....|     ::.|.|..|       |..:|:|:::..|:.
Yeast    67 RKRKQIILQQHEINIFLRDYQEKQQTFNK-----INRPEETQEDDKDLPNFERKLQQLEKELKNE 126

  Fly    99 PAEVSVPLSVEFDEMIRVYNNPD-------------DMSALVEFTDEEGGGRYLDLNECYELYLN 150
            .....:.::.:.|:.....::.|             |:.....||.:|..|.|::|.:.:.|:||
Yeast   127 DENFELDINSKKDKYALFSSSSDPSRRTNILSDRARDLDLNEIFTRDEQYGEYMELEQFHSLWLN 191

  Fly   151 L------RSVEKLDYI-TYLMSFDHVFDIPRERKNREYRIYIETLNDYLHHFILRIQPLLDLEGE 208
            :      ..::.||.: .:|....::...|.:|||..|..::..|:.|:..|..:...|||....
Yeast   192 VIKRGDCSLLQFLDILELFLDDEKYLLTPPMDRKNDRYMAFLLKLSKYVETFFFKSYALLDAAAV 256

  Fly   209 LLKVELDFQRQWLMGTFPGFSIKETESALANTGAHLDLSAFSSWEELASLGLDRLKSALVALGLK 273
            ...::.||:..:..|:                                      |:|.  |.|:.
Yeast   257 ENLIKSDFEHSYCRGS--------------------------------------LRSE--AKGIY 281

  Fly   274 CGGTLEERAQRLFSTKGKSTLDPALMAKKPSAKTASAQSREHERHKEIAQLEALLYKYADLLSEQ 338
            |     ....|.|.|  .|..:..|:.|        ...:...:.:.....|..|::|...|:::
Yeast   282 C-----PFCSRWFKT--SSVFESHLVGK--------IHKKNESKRRNFVYSEYKLHRYLKYLNDE 331

  Fly   339 RAATKENVQRKQARTGGER-DDSDV-----EASESDNEDDPDADDVPYNPK-------------- 383
            .:.|:..|:||.|.|..|| .:.|:     ||...|:.:...|:.|....:              
Yeast   332 FSRTRSFVERKLAFTANERMAEMDILTQKYEAPAYDSTEKEGAEQVDGEQRDGQLQEEHLSGKSF 396

  Fly   384 NLPLGWDGKPIPYWLYKLHGLNISYNCEICGNFTYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHF 448
            ::|||.||.|:||||||||||:..|.||||.|..|.|.:.|:|||.|.||.:.:|||||..::.|
Yeast   397 DMPLGPDGLPMPYWLYKLHGLDREYRCEICSNKVYNGRRTFERHFNEERHIYHLRCLGIEPSSVF 461

  Fly   449 ANVTQIEDAITLWEKLKSQKQSERWVA--------------DQEEEFEDSLGNVVNRKTFEDLKR 499
            ..:|:|::|..||:.::.|.|.....|              :.|.|.||..|||:::|.:::||:
Yeast   462 KGITKIKEAQELWKNMQGQSQLTSIAAVPPKPNPSQLKVPTELELEEEDEEGNVMSKKVYDELKK 526

  Fly   500 QGLL 503
            |||:
Yeast   527 QGLV 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
noiNP_477114.1 PRP9 2..503 CDD:227515 141/587 (24%)
SF3a60_bindingd 74..99 CDD:288924 7/31 (23%)
SF3A3 128..203 CDD:293442 20/81 (25%)
Telomere_Sde2_2 244..301 CDD:290036 10/56 (18%)
DUF3449 324..500 CDD:288759 73/209 (35%)
PRP9NP_010254.1 PRP9 1..530 CDD:227515 141/587 (24%)
C2H2 Zn finger 282..304 CDD:275371 7/36 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342053
Domainoid 1 1.000 131 1.000 Domainoid score I1127
eggNOG 1 0.900 - - E1_COG5188
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 146 1.000 Inparanoid score I1148
Isobase 1 0.950 - 0 Normalized mean entropy S1285
OMA 1 1.010 - - QHG54569
OrthoFinder 1 1.000 - - FOG0005236
OrthoInspector 1 1.000 - - oto99646
orthoMCL 1 0.900 - - OOG6_102364
Panther 1 1.100 - - LDO PTHR12786
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1285
SonicParanoid 1 1.000 - - X3755
TreeFam 1 0.960 - -
1514.740

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