DRSC/TRiP Functional Genomics Resources

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Protein Alignment noi and sf3a3

DIOPT Version :9

Sequence 1:NP_477114.1 Gene:noi / 40678 FlyBaseID:FBgn0014366 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_001017118.1 Gene:sf3a3 / 549872 XenbaseID:XB-GENE-947674 Length:501 Species:Xenopus tropicalis


Alignment Length:510 Identity:335/510 - (65%)
Similarity:412/510 - (80%) Gaps:16/510 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 METLLEQQRRLHEERERLVKLMVDEHATKKPGEKERIHSEHRLKYLMELHHNSTSQLRDLYEDKD 65
            |||:||||||..||:|||:.:|..|..:|||..:|:|:|:||.:.:::.:...:|.|||||||||
 Frog     1 METILEQQRRYQEEKERLMDVMSKEMMSKKPTLREQINSDHRARAMLDQYMEVSSNLRDLYEDKD 65

  Fly    66 NERKAEIAALSGPNEFNEFYARLKQIKQFYKSHPAEVSVPLSVEFDEMIRVYNNP-DDMSALVEF 129
            ..||.|:.|:||||||.|||.|||.||:|::.||.|:.||:||||||:::...|| ::...||||
 Frog    66 GLRKEELTAISGPNEFGEFYNRLKLIKEFHRKHPNEICVPMSVEFDELLKTRENPSEEAQNLVEF 130

  Fly   130 TDEEGGGRYLDLNECYELYLNLRSVEKLDYITYLMSFDHVFDIPRERKNREYRIYIETLNDYLHH 194
            |||||.|||:||::||..|:||:|.|||||||||.:||.:||||:||||.||:.|:|.|.:||..
 Frog   131 TDEEGYGRYMDLHDCYLKYINLKSSEKLDYITYLATFDQLFDIPKERKNAEYKRYLEVLLEYLQD 195

  Fly   195 FILRIQPLLDLEGELL-KVELDFQRQWLMGTFPGFSIKETESALANTGAHLDLSAFSSWEELASL 258
            :..|::||.| :.||. |::::|:::|..|.|||:. |||.|||.:.||||||||||||||||||
 Frog   196 YTDRVKPLQD-QNELFGKIQIEFEKKWEAGAFPGWP-KETSSALTHAGAHLDLSAFSSWEELASL 258

  Fly   259 GLDRLKSALVALGLKCGGTLEERAQRLFSTKGKS--TLDPALMAKKPSAKTASAQSREHERHKEI 321
            |||||||||:||||||||||||||||||||||||  :|||:|.||.|.||   ...|:.|::|:|
 Frog   259 GLDRLKSALMALGLKCGGTLEERAQRLFSTKGKSLESLDPSLFAKNPKAK---GTRRDTEKNKDI 320

  Fly   322 AQLEALLYKYADLLSEQRAATKENVQRKQARTGGERDDSD---VEASESDNEDDPDADDVPYNPK 383
            |.|||.:|:|.::|.|||..|.|||||||||||.||::.:   :..||||:||    :::.||||
 Frog   321 AFLEAQVYEYVEILGEQRHLTHENVQRKQARTGEEREEEEEEQISESESDDED----NEIIYNPK 381

  Fly   384 NLPLGWDGKPIPYWLYKLHGLNISYNCEICGNFTYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHF 448
            |||||||||||||||||||||||:|||||||||||:|||||||||||||||||||||||||||||
 Frog   382 NLPLGWDGKPIPYWLYKLHGLNINYNCEICGNFTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHF 446

  Fly   449 ANVTQIEDAITLWEKLKSQKQSERWVADQEEEFEDSLGNVVNRKTFEDLKRQGLL 503
            |||||||||::||.|||.||.||||..|.|||:|||.|||||:||:|||||||||
 Frog   447 ANVTQIEDAVSLWSKLKHQKASERWQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
noiNP_477114.1 PRP9 2..503 CDD:227515 332/507 (65%)
SF3a60_bindingd 74..99 CDD:288924 16/24 (67%)
SF3A3 128..203 CDD:293442 46/74 (62%)
Telomere_Sde2_2 244..301 CDD:290036 52/58 (90%)
DUF3449 324..500 CDD:288759 134/178 (75%)
sf3a3NP_001017118.1 PRP9 2..501 CDD:227515 332/507 (65%)
DUF3449 323..500 CDD:371805 136/180 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 296 1.000 Domainoid score I1460
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4949
Inparanoid 1 1.050 678 1.000 Inparanoid score I720
OMA 1 1.010 - - QHG54569
OrthoDB 1 1.010 - - D215654at33208
OrthoFinder 1 1.000 - - FOG0005236
OrthoInspector 1 1.000 - - oto103850
Panther 1 1.100 - - LDO PTHR12786
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1285
SonicParanoid 1 1.000 - - X3755
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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