DRSC/TRiP Functional Genomics Resources

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Protein Alignment noi and sf3a3

DIOPT Version :9

Sequence 1:NP_477114.1 Gene:noi / 40678 FlyBaseID:FBgn0014366 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_001004289.1 Gene:sf3a3 / 446168 ZFINID:ZDB-GENE-040908-1 Length:501 Species:Danio rerio


Alignment Length:508 Identity:330/508 - (64%)
Similarity:410/508 - (80%) Gaps:12/508 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 METLLEQQRRLHEERERLVKLMVDEHATKKPGEKERIHSEHRLKYLMELHHNSTSQLRDLYEDKD 65
            |||:||||||.|||:|||:.....|..|||...:::|:|:||::.:::.:...::.|||||||||
Zfish     1 METILEQQRRYHEEKERLMDAKTKEMLTKKTTLRDQINSDHRVRAMLDRYMEVSANLRDLYEDKD 65

  Fly    66 NERKAEIAALSGPNEFNEFYARLKQIKQFYKSHPAEVSVPLSVEFDEMIRVYNNP-DDMSALVEF 129
            ..||.|:.|:||||||.|||.|||.||:|::.||.|:.||:||||:|:::..:|| ::...||||
Zfish    66 GMRKDELNAISGPNEFAEFYNRLKLIKEFHRKHPNEICVPMSVEFEELMKAKDNPSEEAQNLVEF 130

  Fly   130 TDEEGGGRYLDLNECYELYLNLRSVEKLDYITYLMSFDHVFDIPRERKNREYRIYIETLNDYLHH 194
            |||||.||||||::||..|:||:.||||:|:|||.:||.:|||.::|||.||:.|:|.|.:||..
Zfish   131 TDEEGYGRYLDLHDCYLKYINLKGVEKLEYVTYLSTFDQLFDISKDRKNAEYKKYLEMLLEYLQE 195

  Fly   195 FILRIQPLLDLEGELL-KVELDFQRQWLMGTFPGFSIKETESALANTGAHLDLSAFSSWEELASL 258
            :..|::|||| :.||. |:..:|:::|..|.|||:. |||.|||.:.||||||||||||||||||
Zfish   196 YTDRVKPLLD-QNELYGKILAEFEKKWETGMFPGWP-KETSSALTHAGAHLDLSAFSSWEELASL 258

  Fly   259 GLDRLKSALVALGLKCGGTLEERAQRLFSTKGKS--TLDPALMAKKPSAKTASAQSREHERHKEI 321
            |||||||||:||||||||||||||||||||||||  :|||:|.||.|.||   ...::.||:||.
Zfish   259 GLDRLKSALMALGLKCGGTLEERAQRLFSTKGKSLESLDPSLFAKNPKAK---GPKKDSERNKES 320

  Fly   322 AQLEALLYKYADLLSEQRAATKENVQRKQARTGGERDDSDVE-ASESDNEDDPDADDVPYNPKNL 385
            |.|||.:|:|.::|.|||..:.|||||||||||.|||:.|.| .|||::||:.  :::.||||||
Zfish   321 AFLEAQIYEYVEILGEQRQLSHENVQRKQARTGEERDEEDEEQPSESESEDED--NEIIYNPKNL 383

  Fly   386 PLGWDGKPIPYWLYKLHGLNISYNCEICGNFTYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHFAN 450
            |||||||||||||||||||||:||||||||:||:|||||||||||||||||||||||||||||||
Zfish   384 PLGWDGKPIPYWLYKLHGLNINYNCEICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFAN 448

  Fly   451 VTQIEDAITLWEKLKSQKQSERWVADQEEEFEDSLGNVVNRKTFEDLKRQGLL 503
            |||||||::||.||||||..|||..|.|||:|||.|||||:||:|||||||||
Zfish   449 VTQIEDAVSLWSKLKSQKALERWQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
noiNP_477114.1 PRP9 2..503 CDD:227515 327/505 (65%)
SF3a60_bindingd 74..99 CDD:288924 16/24 (67%)
SF3A3 128..203 CDD:293442 43/74 (58%)
Telomere_Sde2_2 244..301 CDD:290036 52/58 (90%)
DUF3449 324..500 CDD:288759 134/176 (76%)
sf3a3NP_001004289.1 PRP9 2..501 CDD:227515 327/505 (65%)
SF3a60_bindingd 74..100 CDD:288924 17/25 (68%)
SF3A3 129..204 CDD:293442 43/74 (58%)
Telomere_Sde2_2 244..303 CDD:290036 52/58 (90%)
DUF3449 323..498 CDD:288759 134/176 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576355
Domainoid 1 1.000 298 1.000 Domainoid score I1424
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4949
Inparanoid 1 1.050 665 1.000 Inparanoid score I730
OMA 1 1.010 - - QHG54569
OrthoDB 1 1.010 - - D215654at33208
OrthoFinder 1 1.000 - - FOG0005236
OrthoInspector 1 1.000 - - oto38840
orthoMCL 1 0.900 - - OOG6_102364
Panther 1 1.100 - - LDO PTHR12786
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3755
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.910

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