DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment noi and Sf3a3

DIOPT Version :9

Sequence 1:	NP_477114.1	Gene:	noi / 40678	FlyBaseID:	FBgn0014366	Length:	503	Species:	Drosophila melanogaster
Sequence 2:	NP_001020869.1	Gene:	Sf3a3 / 313583	RGDID:	1308726	Length:	501	Species:	Rattus norvegicus

Alignment Length:	508	Identity:	333/508 - (65%)
Similarity:	410/508 - (80%)	Gaps:	12/508 - (2%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 METLLEQQRRLHEERERLVKLMVDEHATKKPGEKERIHSEHRLKYLMELHHNSTSQLRDLYEDKD 65
            |||:||||||.|||:|||:.:|..|..|||...:::|:|:||.:.:.:.:...:..|||||:|||
  Rat     1 METILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDLYDDKD 65

  Fly    66 NERKAEIAALSGPNEFNEFYARLKQIKQFYKSHPAEVSVPLSVEFDEMIRVYNNP-DDMSALVEF 129
            ..||.|:.|:||||||.|||.||||||:|::.||.|:.||:||||:|:::...|| ::...||||
  Rat    66 GLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSVEFEELLKARENPSEEAQNLVEF 130

  Fly   130 TDEEGGGRYLDLNECYELYLNLRSVEKLDYITYLMSFDHVFDIPRERKNREYRIYIETLNDYLHH 194
            |||||.||||||::||..|:||::.|||||||||..||.:||||:||||.||:.|:|.|.:||..
  Rat   131 TDEEGYGRYLDLHDCYLKYINLKASEKLDYITYLSIFDQLFDIPKERKNAEYKRYLEMLLEYLQD 195

  Fly   195 FILRIQPLLDLEGELL-KVELDFQRQWLMGTFPGFSIKETESALANTGAHLDLSAFSSWEELASL 258
            :..|::||.| :.||. |::.||:::|..|||||:. |||.|||.:.||||||||||||||||||
  Rat   196 YTDRVKPLQD-QNELFGKIQTDFEKKWDNGTFPGWP-KETSSALTHAGAHLDLSAFSSWEELASL 258

  Fly   259 GLDRLKSALVALGLKCGGTLEERAQRLFSTKGKS--TLDPALMAKKPSAKTASAQSREHERHKEI 321
            |||||||||:||||||||||||||||||||||||  :||.:|.||.|.:|   ...|:.||:|:|
  Rat   259 GLDRLKSALLALGLKCGGTLEERAQRLFSTKGKSLESLDTSLFAKNPKSK---GTKRDTERNKDI 320

  Fly   322 AQLEALLYKYADLLSEQRAATKENVQRKQARTGGERDDSDVE-ASESDNEDDPDADDVPYNPKNL 385
            |.|||.:|:|.::|.|||..|.|||||||||||.||::.:.| .|||::||  :.:::.||||||
  Rat   321 AFLEAQIYEYVEILGEQRQLTHENVQRKQARTGEEREEEEEEQISESESED--EENEIIYNPKNL 383

  Fly   386 PLGWDGKPIPYWLYKLHGLNISYNCEICGNFTYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHFAN 450
            |||||||||||||||||||||:||||||||:||:|||||||||||||||||||||||||||||||
  Rat   384 PLGWDGKPIPYWLYKLHGLNINYNCEICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFAN 448

  Fly   451 VTQIEDAITLWEKLKSQKQSERWVADQEEEFEDSLGNVVNRKTFEDLKRQGLL 503
            |||||||::||.|||.||.||||..|.|||:|||.|||||:||:|||||||||
  Rat   449 VTQIEDAVSLWAKLKLQKASERWQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL 501

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
noi	NP_477114.1	PRP9	2..503	CDD:227515	330/505 (65%)
		SF3a60_bindingd	74..99	CDD:288924	17/24 (71%)
		SF3A3	128..203	CDD:293442	46/74 (62%)
		Telomere_Sde2_2	244..301	CDD:290036	51/58 (88%)
		DUF3449	324..500	CDD:288759	133/176 (76%)
Sf3a3	NP_001020869.1	PRP9	2..501	CDD:227515	330/505 (65%)
Sf3a3	NP_001020869.1	DUF3449	323..500	CDD:403216	135/178 (76%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166337227
Domainoid	1	1.000	295	1.000	Domainoid score	I1428
eggNOG	1	0.900	-	-		E1_COG5188
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H4949
Inparanoid	1	1.050	670	1.000	Inparanoid score	I706
OMA	1	1.010	-	-		QHG54569
OrthoDB	1	1.010	-	-		D215654at33208
OrthoFinder	1	1.000	-	-		FOG0005236
OrthoInspector	1	1.000	-	-		oto97157
orthoMCL	1	0.900	-	-		OOG6_102364
Panther	1	1.100	-	-	LDO	PTHR12786
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X3755
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	15	14.770