DRSC/TRiP Functional Genomics Resources

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Protein Alignment noi and prp-9

DIOPT Version :9

Sequence 1:NP_477114.1 Gene:noi / 40678 FlyBaseID:FBgn0014366 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_495799.1 Gene:prp-9 / 174364 WormBaseID:WBGene00011758 Length:500 Species:Caenorhabditis elegans


Alignment Length:511 Identity:251/511 - (49%)
Similarity:363/511 - (71%) Gaps:19/511 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 METLLEQQRRLHEERERLVKLMVDEHATKKPGEKERIHSEHRLKYLMELHHNSTSQLRDLYEDKD 65
            |::.||..|.||||||||:.:.|.|...:|...|.:::||.|:|..::.:::.:::|...|:|:|
 Worm     1 MDSCLETIRNLHEERERLIDITVKEKIAEKLTHKAKVNSEQRVKTFVDRYYSVSAELAKFYKDED 65

  Fly    66 NERKAEIAALSGPNEFNEFYARLKQIKQFYKSHPAEVSVPLSVEFDEMIRVYNNPD----DMSAL 126
            ..:..|:.::||||||.|||:|||.||..::.:|.|::.||:|||.::.....||:    ||   
 Worm    66 GSKSMEMDSVSGPNEFAEFYSRLKVIKDAHRRNPDELAEPLTVEFQKINEEIINPERAEPDM--- 127

  Fly   127 VEFTDEEGGGRYLDLNECYELYLNLRSVEKLDYITYLMSFDHVFDIPRE--RKNREYRIYIETLN 189
            |||:|||..||:|||:..|:.::||::::::||:|||::|:...:||:.  :|...|:.||.:|.
 Worm   128 VEFSDEEAYGRFLDLHAQYDKFINLKNIKRVDYMTYLLNFEKFTEIPKNTTKKTGAYKEYINSLK 192

  Fly   190 DYLHHFILRIQPLLDLEGELLKVELDFQRQWLMGTFPGFSIKETESALANTGAHLDLSAFSSWEE 254
            |||..|:.|.:||.||:....:|....:|.:..|..||:...:.::  ....|.:|||.::|.||
 Worm   193 DYLVSFMQRTRPLHDLDSVFSEVNQTVERAFKAGNLPGWEADKNKN--GPQAAAVDLSPYNSAEE 255

  Fly   255 LASLGLDRLKSALVALGLKCGGTLEERAQRLFSTKGK--STLDPALMAKKPSAKTASAQSREHER 317
            |..|||:|||.||:|:||||||||:|||.|||:|||.  |.|:.|.|    |:..:.|: :::.:
 Worm   256 LEGLGLERLKGALMAIGLKCGGTLKERADRLFATKGHKLSDLEKAAM----SSNNSDAE-KQNAK 315

  Fly   318 HKEIAQLEALLYKYADLLSEQRAATKENVQRKQARTGGERDDSDVEASESDNEDDPDADDVPYNP 382
            :..:||.||.:...||:|:|:|..|:|||:|||||:.||.::.:.|....:.|::.| :..||||
 Worm   316 NLTLAQTEAHIMALADILAEERTGTRENVERKQARSAGEVEEEEEEEIVIEEEEEID-ESAPYNP 379

  Fly   383 KNLPLGWDGKPIPYWLYKLHGLNISYNCEICGNFTYKGPKAFQRHFAEWRHAHGMRCLGIPNTAH 447
            |||||||||||||||||||||||:||:||||||.|||||||||:||.||||:|||||||||||:|
 Worm   380 KNLPLGWDGKPIPYWLYKLHGLNLSYSCEICGNQTYKGPKAFQKHFNEWRHSHGMRCLGIPNTSH 444

  Fly   448 FANVTQIEDAITLWEKLKSQKQSERWVADQEEEFEDSLGNVVNRKTFEDLKRQGLL 503
            |||:|:|:||:.||.|||::|:..:|..|.:||:|||.||||.||.:|||||||||
 Worm   445 FANITKIKDALDLWNKLKTEKEMAKWNPDIDEEYEDSSGNVVTRKMYEDLKRQGLL 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
noiNP_477114.1 PRP9 2..503 CDD:227515 248/508 (49%)
SF3a60_bindingd 74..99 CDD:288924 14/24 (58%)
SF3A3 128..203 CDD:293442 32/76 (42%)
Telomere_Sde2_2 244..301 CDD:290036 37/58 (64%)
DUF3449 324..500 CDD:288759 113/175 (65%)
prp-9NP_495799.1 PRP9 3..500 CDD:227515 248/507 (49%)
DUF3449 323..499 CDD:371805 115/176 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157587
Domainoid 1 1.000 264 1.000 Domainoid score I1017
eggNOG 1 0.900 - - E1_COG5188
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4949
Inparanoid 1 1.050 502 1.000 Inparanoid score I742
Isobase 1 0.950 - 0 Normalized mean entropy S1285
OMA 1 1.010 - - QHG54569
OrthoDB 1 1.010 - - D215654at33208
OrthoFinder 1 1.000 - - FOG0005236
OrthoInspector 1 1.000 - - oto20102
orthoMCL 1 0.900 - - OOG6_102364
Panther 1 1.100 - - LDO PTHR12786
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1285
SonicParanoid 1 1.000 - - X3755
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1716.750

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