DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rev7 and mad2l2

DIOPT Version :9

Sequence 1:NP_649555.1 Gene:Rev7 / 40677 FlyBaseID:FBgn0037345 Length:198 Species:Drosophila melanogaster
Sequence 2:XP_017950824.1 Gene:mad2l2 / 448122 XenbaseID:XB-GENE-973653 Length:220 Species:Xenopus tropicalis


Alignment Length:194 Identity:54/194 - (27%)
Similarity:98/194 - (50%) Gaps:4/194 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIKADIIVEAMEVLVNHILYVRGIYPSHIFKMKRMYNSPIYVSIFPPLNNYLAGVLKSAQELLRR 68
            ::.|||:.|.:||.|:.|||||.:||..||:.::.||.|:.:|..|.||.|:...|...:.|:.:
 Frog    22 QVVADILCEFLEVAVHLILYVREVYPIGIFQKRKKYNVPVQMSCHPELNRYIQDTLHCVKPLIEK 86

  Fly    69 RELQCLELIVYQKENEKLESYKMQL-ETQRSGLPAEDHLMEFEQNMRSVIYKISQRLNQAPKLPA 132
            .:::.:.:::..||:..:|.:..:: :.....:.::..|...||.:|:.|.|||.........|.
 Frog    87 NDVEKVVVVILDKEHHPVERFVFEIAQPPLLSISSDSLLSHVEQLLRAFILKISVCDAVLDNNPP 151

  Fly   133 GSCQFKVHLHTTQEAFIRFSHDSQYQEFPWLQTQKTESQATGRTVYLLPLARVDDLGLKMDVLI 196
            | |.|.:.:||.:.|..........::|||:...  |.....:...|:||..:....|||.:.:
 Frog   152 G-CTFTLLVHTREAATRNMEKIQVIKDFPWILAD--EQDVHMQEPRLIPLKTMTSDILKMQLYV 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rev7NP_649555.1 None
mad2l2XP_017950824.1 HORMA 30..>109 CDD:367025 26/78 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 61 1.000 Domainoid score I10318
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 87 1.000 Inparanoid score I4991
OMA 1 1.010 - - QHG59766
OrthoDB 1 1.010 - - D1630737at2759
OrthoFinder 1 1.000 - - FOG0006157
OrthoInspector 1 1.000 - - oto105357
Panther 1 1.100 - - LDO PTHR11842
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1083
SonicParanoid 1 1.000 - - X5884
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.110

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