DRSC/TRiP Functional Genomics Resources

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Protein Alignment PolZ2 and mad2l1

DIOPT Version :10

Sequence 1:NP_649555.1 Gene:PolZ2 / 40677 FlyBaseID:FBgn0037345 Length:198 Species:Drosophila melanogaster
Sequence 2:NP_001096528.1 Gene:mad2l1 / 100125170 XenbaseID:XB-GENE-947153 Length:203 Species:Xenopus tropicalis


Alignment Length:144 Identity:41/144 - (28%)
Similarity:73/144 - (50%) Gaps:5/144 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ADIIVEAMEVLVNHILYVRGIYPSHIFKMKRMYNSPIYVSIFPPLNNYLAGVLKSAQELLRRREL 71
            |:|:.|.....:|.|||.||||||..|...:.|...:.::..|.|..||..|....::.|.:.::
 Frog    16 AEIVSEFFFCGINSILYQRGIYPSETFTRIQKYGLTLLLTTDPGLKEYLNKVTDQLKDWLYKCQV 80

  Fly    72 QCLELIVYQ-KENEKLESYKMQLE---TQRSGLPAEDHLMEFEQNMRSVIYKISQRLNQAPKLPA 132
            |.|.:::.. ..||.||.::..:|   |.:.|:..|......::.:||||.:|:..:...|.|..
 Frog    81 QKLVVVITSIDSNEILERWQFDIECDKTVKDGIVREKSQKVIQEEIRSVIRQITATVTFLPLLET 145

  Fly   133 GSCQFKVHLHTTQE 146
             :|.|.:.::|.::
 Frog   146 -ACAFDLLIYTDKD 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PolZ2NP_649555.1 None
mad2l1NP_001096528.1 HORMA 15..189 CDD:460526 41/144 (28%)

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