DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2926 and Scaf1

DIOPT Version :9

Sequence 1:NP_649554.1 Gene:CG2926 / 40676 FlyBaseID:FBgn0037344 Length:2296 Species:Drosophila melanogaster
Sequence 2:XP_008757631.3 Gene:Scaf1 / 56081 RGDID:708405 Length:1392 Species:Rattus norvegicus


Alignment Length:2024 Identity:388/2024 - (19%)
Similarity:557/2024 - (27%) Gaps:968/2024 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly   432 RRRRRRRRRGVATASSEGPGRRLSASKRLAEQMGVKSEGFQSSHLSGGTASSFSLFGNANDLEYF 496
            ||.|.|...|..|...|      ..|:...|:.|                            |..
  Rat   122 RRDRSRSPSGGVTMEEE------DESRGKTEESG----------------------------EDR 152

  Fly   497 SDSEPDAVSQISSAGLGSTAVQTSV-----------RIGSIGAPRIRKALLQGKARIAAPPTAPT 550
            .|..||....:|.:.....|:|.:|           :.||      |...||.:....:|.:.|.
  Rat   153 GDGPPDRDPALSPSAFILRAIQQAVGSSLQGDLPNDKDGS------RCCGLQWRRCCRSPRSEPR 211

  Fly   551 SA------------PAADI----LSSILDLQDRW------------HDASRNLGEVHIRADGTLN 587
            |.            .|||.    |.||||..|.|            .|....:.||.|.      
  Rat   212 SQESGGADMATVLDTAADSFLVELVSILDPPDTWVPSHLDLQPGESEDVLELVAEVRIG------ 270

  Fly   588 IPQRPAPTATEAPLPKAGTSKTEKHLTQAPLYQQGGGGPNYNRGGGAGSSDSYNNRYSGNTSYRG 652
             .:.|.|....:.||:....:|.|.:                      |..|:.:|         
  Rat   271 -DRDPMPLPVPSLLPRLRAWRTGKTV----------------------SPQSHASR--------- 303

  Fly   653 GGGGGAGGSSGGSGVPSSSGEASSRHLTGEGDGQGGGGFGNQNFSSSGSNNNTNMSSFIPFHLRF 717
                                .|.||||...|.|.||                             
  Rat   304 --------------------PACSRHLLTLGTGDGG----------------------------- 319

  Fly   718 NTPTRQQQPRQQNVLPANQPTPPFPGSAPPPAPVASSSNNFSGQTPMFAAPLNHHPAPVMGMPVV 782
                           ||..|.|....|:|.|:|.:||.:                |.|       
  Rat   320 ---------------PAPPPAPSSASSSPSPSPSSSSPS----------------PPP------- 346

  Fly   783 LSIPPPPMPPASLPWNSPLFKI----TPLQQA----PAKSNDGNQNDDVDNCPNFSIYSQESQAV 839
               ||||.||.:||  :|.|.|    .|..:|    ||.....:..:...:.|:.|         
  Rat   347 ---PPPPPPPPALP--APRFDIYDPFHPTDEAYSPPPAPEQKYDPFEPTGSNPSSS--------- 397

  Fly   840 ANASAMPSGVPHGPADASDKDDDDMNEDLVQ------------LDDDDEDTDIPLPLGPEPEPVP 892
                   :|.| .|.:..::::::..|.|.|            .||:....|.|....|..||.|
  Rat   398 -------AGTP-SPEEEEEEEEEEEEEGLSQSISRISETLAGIYDDNSLSQDFPGDDSPHREPPP 454

  Fly   893 EK------VPKSSDDDLYE-----------PEN-----------------------PTEEPEEPE 917
            .:      .|..:|....|           ||.                       |...|.:||
  Rat   455 PQTLGAPGTPPQADSTRAEGAPRRRVFVVGPEAEACLEGKVSVEVVTTAGGPALPLPPLPPTDPE 519

  Fly   918 MFEESCDAVPTEKSESSDHEP--SNSNVQAAAPEENDAEEARTRSTPSPLVKEDRAADRDRAKGV 980
            : ||.....|.|       ||  :.|..:||.|.:..|..|...|..:|......|.........
  Rat   520 I-EEGEIVQPEE-------EPRVAVSLFRAARPRQPPASVATLASVAAPAAPPASAPRAPEGDDF 576

  Fly   981 LELYDDSDWE---ELDIDKPKEFEKALLTETEAQVSPKRAPSKRPPSKKDTSLERDVNESGSEHE 1042
            |.|:.|||.|   ::|:.:|                    |:  ||:                  
  Rat   577 LSLHADSDGEGALQVDLGEP--------------------PA--PPA------------------ 601

  Fly  1043 QDRSYTPCLDEKNLAEEEEAGTTHQNNVSTSPKTRSSKVSGDEDEPEKAVGTDIQSEDELNNENE 1107
                          |:....|...:..:.|..:.|..:.|.....|                   
  Rat   602 --------------ADARWGGLDLRRKILTQRRERYRQRSASPGPP------------------- 633

  Fly  1108 SPRRSRSRGTANNKKDKSKSRSKRNKGETFKKVGKRQKDRNYRGDKSEPDRSPRPDSRSLTPKMR 1172
             |.|.::|                             ::|...||.:.||          :|...
  Rat   634 -PARKKAR-----------------------------RERQRSGDPAPPD----------SPTWE 658

  Fly  1173 SKSPRVSKSISRSRS-GSRSRCKSKSFSRSRSRSPSRSRNRRRRNSRSKSYSRSHSRSRSRSNSH 1236
            :|..|     ||.|. ||.|..:.:|.||||.||.|||.:|||.:.||:|..:...|.||.|...
  Rat   659 AKKHR-----SRERKLGSHSTARRRSRSRSRRRSRSRSADRRRGSHRSRSREKRRRRRRSASPPP 718

  Fly  1237 SRQRFSFRGRDHQRGFFRGRGGLRLNYRNQQFHNRPFQHYGQNYHQNQNYHHQHNQHQNYFPPNQ 1301
            :....|...|:..||                                                  
  Rat   719 AASSSSSSRRERHRG-------------------------------------------------- 733

  Fly  1302 HGQHQQYFQRPKRRELPRYDVRNVVGTSRHQTQAKDRYGRDAMRSHRSRSGRRNSRSFSRSVSRD 1366
                       ||||                                  .|::..:   ||.||.
  Rat   734 -----------KRRE----------------------------------GGKKKKK---RSRSRA 750

  Fly  1367 SRVSLRSRSGSPKRRSFSMSPTPPPGTSPPPHKHGR----------------------GRQTSTN 1409
            .:     |||..::..   :|.||.|:.....:.|.                      ||...|.
  Rat   751 EK-----RSGDLEKLP---APVPPSGSDRDSRRRGAVPPSIQDLTDHDLFAIKRTITVGRPDKTE 807

  Fly  1410 RRYARSPSPAPSPRNE---------------------RATSPVQSVHSRRSRSHTPNRINGDGNR 1453
            .| |.||:||.||:.|                     |.:....|..|.|.::.....::||..|
  Rat   808 PR-APSPAPAVSPKREVLYDSEGLSADERGAKGDKDRRRSGAASSSSSSREKASRRKALDGDRGR 871

  Fly  1454 SSLYMGSPHYTPRISRSRSRSRSKSPKDMHKKKKKKSDKKKRRKRTGSSSPTTAARMRRISRQRD 1518
                          .|.||..:::.|||   .........|....:||||.:::...|::..|  
  Rat   872 --------------DRDRSSKKTRPPKD---SAPGSGALPKAPPSSGSSSSSSSCSSRKVKLQ-- 917

  Fly  1519 PFEDADDFLAPQRKRKKAGITTGQWSPSPSPGRCDFLHDSALQDKNSSWTPPLG----------- 1572
                           .|..:...:...|.:|.:          |.:||....:|           
  Rat   918 ---------------SKVAVLIREGVSSTTPAK----------DSSSSGLGSIGVKFSRDRESRS 957

  Fly  1573 --------TPKGGHYNNDGGLTPKKTKRKRDKSKKKRKQHQ-LEKPRKEKKRKRRTQTPEPLPSK 1628
                    .|..|.....|...|||||.|.....||.|..: ..||.|.:|:.|           
  Rat   958 PFLKPDERAPAEGVKVAPGSTKPKKTKAKAKAGAKKAKGTKGKTKPSKTRKKVR----------- 1011

  Fly  1629 EVFASGNNILVSVSFNKESNTNNASATLSSQQQSVVTIPPGREDLLSNRMTSMTSMASMASNSNI 1693
                                 :..|:|.|                                    
  Rat  1012 ---------------------SGGSSTAS------------------------------------ 1019

  Fly  1694 CSAVGAVKKTKRKRKKLEAKPVAIIDLERSPFQVHQEPADVIVLTDSEDATEPLSSRRERERDRD 1758
             ...|::||:|                           ||......|...||..|...|      
  Rat  1020 -GGPGSLKKSK---------------------------ADSCSQAASAKGTEETSWSGE------ 1050

  Fly  1759 HELMRENGQREKTPQVGSLDAIMETSYENMTQSTGPKTPPEPPLVKFNLPTKKIQHKVRNNPLHE 1823
                      |:|.:..|              :..||..|.||.:               .|..:
  Rat  1051 ----------ERTTKAPS--------------TPPPKVAPPPPAL---------------TPDSQ 1076

  Fly  1824 DVDDINSADELEASCSMAPAEQTPQHGHASHDGGQKIGPNTPPESGPCSPDAYDPFEP--TKSPS 1886
            .||         :||........|:  .||.|.|.::|.....|... ..:..:..:|  |.:.|
  Rat  1077 TVD---------SSCKTPEVSFLPE--EASEDTGVRVGAEEEEEEEE-EEEEEEEQQPATTTATS 1129

  Fly  1887 LSPRSPTLTPSQNLDQQTVSMPASGAIGPGSGDKGESDGAHVTGSNASTNTQAQGNALNPVDLVM 1951
            .:..:|:..||               .|..:||.|..||.....|...|        |.|     
  Rat  1130 TAAAAPSTAPS---------------AGSTAGDSGAEDGPAARASQLPT--------LPP----- 1166

  Fly  1952 ALMNKPNQSGSIQQESEVSSAQYISSSSLSLSLGVGSSTGGGGGGAGGGDNHDKTADGKTITVLS 2016
                                     ....:|..||..:|.|                   :..|:
  Rat  1167 -------------------------PMPWNLPAGVDCTTSG-------------------VLALT 1187

  Fly  2017 NVLL-----------TSSSVVSSSQHIPSISSPTPPSKKLTPLPKAGGSVASSSSGVGNIPTTSS 2070
            .:|.           .:..::.::..|.|...| |.:..:||.|               :||:  
  Rat  1188 ALLFKMEEANLASRAKAQELIQATNQILSHRKP-PSTLGVTPAP---------------VPTS-- 1234

  Fly  2071 GIGGTRNGSGLGNAGGSSNALDDSFSMEIESPYSPGSADYEDLFEPPIPLEASRRAKGGATGGKV 2135
                      ||...|.|:.|            .|||          :|:       ||.     
  Rat  1235 ----------LGLPPGPSSYL------------LPGS----------LPI-------GGC----- 1255

  Fly  2136 EIFDNLFGSSSPISNIRMTSRYNTAVGKKSNRTKADRKSKVKGARNPDFYDDVPNSATDLQNKDR 2200
                   ||:.|..         |.:...|::.:....|:.:|                  :.|:
  Rat  1256 -------GSTPPTP---------TGLVPASDKREGSSSSEGRG------------------DTDK 1286

  Fly  2201 LLRKLNRQERVVEEVKLVLKPYFNKKAITKDDYKDIMRRAVPKICHSRSGEINPHKIKNLIDAYV 2265
            .|:||:.|||.||||||.:|||:.||.|||::||||:|:||.|||||:||||||.|:.||:.|||
  Rat  1287 YLKKLHTQERAVEEVKLAIKPYYQKKDITKEEYKDILRKAVHKICHSKSGEINPVKVSNLVRAYV 1351

  Fly  2266 RKFR--AKH 2272
            :::|  .||
  Rat  1352 QRYRYFRKH 1360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2926NP_649554.1 zf-RING_2 155..196 CDD:290367
PHD_PHRF1 246..291 CDD:277011
Scaf1XP_008757631.3 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353499
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.930

Return to query results.
Submit another query.