DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2926 and Phrf1

DIOPT Version :9

Sequence 1:NP_649554.1 Gene:CG2926 / 40676 FlyBaseID:FBgn0037344 Length:2296 Species:Drosophila melanogaster
Sequence 2:XP_006230572.1 Gene:Phrf1 / 245925 RGDID:708360 Length:1700 Species:Rattus norvegicus


Alignment Length:2393 Identity:525/2393 - (21%)
Similarity:786/2393 - (32%) Gaps:897/2393 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 EVASHSDS-DSVPRKSTRKLRNRYGPRSDCSSSGSDID---QLPTRTRKRKKVESSDEEEPERTP 125
            |:.:||.. |..|:..:.:|.:.....|:..|..|:.|   :....|...:....|:||:||...
  Rat     8 ELVAHSPGPDGPPQVGSSELASDAEESSNGHSEDSEDDTGSEQDDDTDGEETEGLSEEEDPEDRS 72

  Fly   126 NAVGRIQPMPADPDDGF---------------SSDISSNDLLEKCPICLLTFRQQEIGTPATCEH 175
            .:        .|.:||.               ||..:|:|..|.|||||..||.|.:|||.||.|
  Rat    73 GS--------EDSEDGIEVPTAAVETQRKLEASSTPNSDDDAESCPICLNAFRDQAVGTPETCAH 129

  Fly   176 IFCAACIDAWSRNVQTCPIDRIEFDRIIVRDSYASRRVVREVRLDLSKSNTELVVDDEADTAALS 240
            .||..||..||||..:||:||..|..|.:|..: :.::::::.::    ||....|:||:     
  Rat   130 YFCLDCIIEWSRNANSCPVDRTIFKCICIRAQF-NGKILKKIPVE----NTRACEDEEAE----- 184

  Fly   241 EEEVTNCEICESPDREDVMLLCDSCNQGYHMDCLDPPLYEIPAGSWYCDNCIDSDDEDDNEQLEL 305
            ||:.|.||:|...||||.:||||.|:.||||:||||||.|:|...|:|..|.....:..::...:
  Rat   185 EEDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAVPGVDPTHDAAPV 249

  Fly   306 AD-DLDQLYEDIRGMGLPET-RLRVREVQEPPRILRTRQNERIRAAVLRRTRSGA---------- 358
            :| ::..|..|:    :|.| |||.| |.....|.||||:||:||.|.|...|.|          
  Rat   250 SDEEVSLLLADV----VPTTSRLRPR-VGRTRAIARTRQSERVRATVNRNRISSARRVQHVPRYL 309

  Fly   359 -TSAEDSTLTRTRTRTTTTTTTTTTTTRRTTTSTKKRPVQRRR----RRRTRYRTYVVEYDLNNF 418
             :|..|.|:....|..:|.......|.|  ..:.:||...||:    |::||.|:.|        
  Rat   310 MSSLLDETIEAVATGLSTAVYQRPLTPR--VPAKRKRKAGRRKKVLGRKKTRSRSSV-------- 364

  Fly   419 DEKFALKTSKKVIRRRRRRRRRGVATASSEGPGRRL----SASKRLAEQMGVK------------ 467
            ..|.....:||  |:.|.||.:          ||:|    :|..|:|..:|::            
  Rat   365 KSKSGGTRAKK--RQHRVRRTK----------GRKLKNEVTARSRIARTLGLRRPVRGTSMPSVY 417

  Fly   468 -----SEGFQSSHLSGGTASSFSLFGNANDLEYF---SDSEPDAVSQISSAG--LGSTAVQTSVR 522
                 |.|...:.:.   |:|.||||:...|:.|   .:...|..|.:|:..  |..:|:|:.  
  Rat   418 KPVDPSLGLMRADIG---AASLSLFGDPYALDPFDSNGEQSADPPSPLSAKRRVLSRSALQSH-- 477

  Fly   523 IGSIGAPRIRKALLQGKARIAAPPTAP----TSAPAADILSSILDLQDRWHDASRNLGEVHIRAD 583
                  ..:.:.:..|.||...|..||    ..||..|:|.|||..|.....:|   .:|.|..|
  Rat   478 ------QPVARPVAMGLARRQLPAVAPEPSVEEAPVPDLLGSILCGQSLLMMSS---ADVVIHRD 533

  Fly   584 GTLNIPQRPAPTA----------TEAPL-----------------------PKAGTSKTEK---- 611
            |:|: .:|.||.:          .|:.|                       |.:|.|..::    
  Rat   534 GSLS-AKRAAPVSLQRNSVTQSREESRLRDNLQPGALPSESVSGGLIGDRRPNSGLSCGDRTALR 597

  Fly   612 ----HLTQAPLYQQGGGGPNYNRGGGAGS-SDSYNNRYSGNTSYRGGGGGGAGGSSGGSGVPSSS 671
                .:.|.|:.......|   |.|.:|: ||....::..:.|.|          ..||.|  ..
  Rat   598 CLPAQIVQTPVRSDSSVTP---RSGLSGNLSDESRPKWKHSNSPR----------LNGSNV--RV 647

  Fly   672 GEASSRHLTGEGDGQGGGGFGNQNFSSSGSNNNTNMSSFIPFHLRFNTPTR---QQQPR------ 727
            |.||::.:|            :.||.|         .:..|.|.:...|.|   .:.||      
  Rat   648 GSASTKTMT------------HSNFPS---------KNIAPGHPQKTDPRRPDFSKLPRIPKIRR 691

  Fly   728 -----QQNVLPANQPTPPFP--------GSAPPPAPVASSSNNFSGQTPMFAAPLNHHPAPVMGM 779
                 .|:..||:..|...|        |...|..|         |:....:.|.:..|... |.
  Rat   692 DGSNSTQDQAPASGQTVELPSACISRLTGREGPGQP---------GRGRADSEPSSRGPQET-GS 746

  Fly   780 PVVLSIPPPPMPPASLPWNSPLFKITPLQQAPAKSNDGNQNDDVDNCPNFSIYSQESQAVANASA 844
            ....|.||.|....:|   :||        .|::......:.:     :|.|             
  Rat   747 HTSGSRPPAPSSHGNL---APL--------GPSRGKGIGSSFE-----SFRI------------- 782

  Fly   845 MPSGVPHGPADASDKDDDDMNEDLVQLDDDDEDTDIPLPLGPEPEPVPEKVPKSSDDDLYEPENP 909
               .:|...|..|.............:|...:..:.|.||      ...|.||....::|:|.:|
  Rat   783 ---NIPGNTAHCSQLSSPGFCNTFRPVDSKVQRKENPSPL------FSIKKPKQLKSEIYDPFDP 838

  Fly   910 TEEPEEPEMFEESCDAVPTEKSESSDHEPSNSNVQAAAPEENDAEEARTRSTPSPL--------- 965
            |                      .||..|.:|:.::.......:|..||.|..||.         
  Rat   839 T----------------------GSDSSPPSSSPESLGSGLLPSEITRTISINSPKAPAFQTVRC 881

  Fly   966 -------------VKEDRAADRDRAKGVLELYDD------SDWEELDIDKPKEFEKALLTETEAQ 1011
                         :..|.....:...|:|||...      ||.|:..:.:        :..||.|
  Rat   882 VTSYRVESVFGTEMDPDPQPPGEPVSGMLELLGKGPAEGASDLEQEGLGE--------IEPTEIQ 938

  Fly  1012 VSPKRAPSKRPPSKKDTSLERDVNESGSEHEQDRSYTPCLDEKNLAEEEEAGT--THQNNVSTSP 1074
            .|..||....||...|       :|.|.      |.||.     ...||...|  |.:.....||
  Rat   939 GSSARAQRPSPPDPWD-------DEDGV------SCTPF-----FGSEERTVTCVTVEEPSVPSP 985

  Fly  1075 KTRSSKVSGDEDEPEKAVGTDIQSEDELNNENESPRRSRSRGTANNKKDKSKSRSKRNKGETFKK 1139
                       |.|:......:          |....||||.|::     |:||.|..|.   ||
  Rat   986 -----------DAPQITTHRIV----------EFRASSRSRSTSS-----SRSRKKTKKK---KK 1021

  Fly  1140 VGKRQKDRNYRGDKSEPDRSPRPDSRSLTPKMRSKSPRVSKSISRSRSGSRSRCKSKSFSRSRSR 1204
            |.:..:                                  ::.|.:|||||.|       .|||.
  Rat  1022 VAREHQ----------------------------------RTRSSTRSGSRDR-------TSRSV 1045

  Fly  1205 SPSRSRNRRRRNSRSKSYSRSHSRSRSRSNSHSRQRFSFRGRDHQRGFFRGRGGLRLNYRNQQFH 1269
            ||....:.:|.  |:|:.||..|..|:.|...:::| ..|.|:|:||                  
  Rat  1046 SPFTEEHTKRH--RAKTKSRRSSSDRASSQDRAKRR-KDRDREHRRG------------------ 1089

  Fly  1270 NRPFQHYGQNYHQNQNYHHQHNQHQNYFPPNQHGQHQQYFQRPKRRELPRYDVRNVVGTSRHQTQ 1334
              |:.| |:.:.::::        ::..|.:...:..:..:|.:|....|...|:   .|.|.:.
  Rat  1090 --PWGH-GRCWRKSRS--------RSGSPGSSSCERHESRRRKRRHSGSRSRGRD---GSPHSSL 1140

  Fly  1335 AKDRYGRDAMRSHRSRSGRRNSRSFSRSVSRDSRVSLRSRSGSPKRRSFSMSPTPPPGTSPPPHK 1399
            .:||     ...||.||..|..:..|.:.||:.| ..||||.|.:.|            :..||.
  Rat  1141 ERDR-----RHKHRERSRERMDKKESMTRSRERR-RWRSRSPSVEHR------------TRRPHS 1187

  Fly  1400 HGRGRQTSTNRRYARSPSPAPSPRNE------RATSPVQSVHSRRSR--SHTPNRINGDGNRSSL 1456
            ..:...:...:...|..||||:|:.|      .:|.|..|..|....  |..|..:..|.|    
  Rat  1188 REKHPHSPEKKGAVREVSPAPAPQGEPRQDGDHSTKPPVSEVSVLPEVVSVLPEVVVADLN---- 1248

  Fly  1457 YMGSPHYTPRISRSRSRSRSKSPKDMHKKKKKKSDKKKRRKRTGSSSPTTAARMRRISRQRDPFE 1521
                   .|.:....:.|.|..|:|:.               .|.|  ..|..:.........|.
  Rat  1249 -------PPEVPPVLAESVSCVPEDLD---------------YGDS--VEAGHVFEDFSNEAIFI 1289

  Fly  1522 DADDFLAPQRKRKKAGITTGQWSPSP-----SPGRCDFLHDSALQDKNSSWTPPLGTPKGGHYNN 1581
            ..||..:|               |||     ||.| |||.:..|        ||...|:..    
  Rat  1290 QLDDMSSP---------------PSPESTDSSPER-DFLPNPIL--------PPASLPQNS---- 1326

  Fly  1582 DGGLTPKKTKRK------RDKSKKKRKQHQLEKPRKEKKRKRRTQTPEPL-PSKEVFASGNNILV 1639
                |...|:|:      .|.||                     ..|:|| ||.:...       
  Rat  1327 ----TLPVTQREVLPIHSEDISK---------------------PAPQPLAPSDQCLL------- 1359

  Fly  1640 SVSFNKESNTNNASATLSSQQQSVVTIPPGRED-LLSNRMTSMTSMASMASNSNICSAVGAVKKT 1703
                 ::......:.|||:..    .:|.|::. |||.|...:.......:.:.:..:...||:.
  Rat  1360 -----RQDTVETTATTLSTPG----VLPMGKDSPLLSGRGCEVVRPKDAVAPAPLLRSRTLVKRV 1415

  Fly  1704 KRKRKKLEAKPVAIIDLERSPFQVHQEPADVIVLTDSEDATEPLSSRRERERDRDHELMRENGQR 1768
            ....::.||...|   |:|.|....:.|..:.|    ..:..||                   ||
  Rat  1416 TWNLQEAEASTPA---LDRDPRLTTRHPNSLSV----GSSGTPL-------------------QR 1454

  Fly  1769 EKTPQVGSLDAIMETSYENMTQSTGPKTPPEPPLVKFNLPTKKIQHKVRNNPLHEDVDDINSADE 1833
            .:.||.|..||                  .:..|:.|                            
  Rat  1455 PQRPQEGDWDA------------------EDRALIGF---------------------------- 1473

  Fly  1834 LEASCSMAPAEQTPQHGHASHDGGQKIGPNTPPESGPCSPDAYDPFEPTKSPSLSPRSPTLTPSQ 1898
                 ..||..:.|...|...:.|.   |:..|...|..|.|..|                    
  Rat  1474 -----QQAPFSELPPPIHVLQESGL---PDADPSQPPGVPRAEGP-------------------- 1510

  Fly  1899 NLDQQTVSMPASGAIGPGSGDKGESDGAHVTGSNASTNTQAQGNALNPVDLVMALMNKPNQSGSI 1963
                     ||.|.:....|                               ::|.:..||....:
  Rat  1511 ---------PAVGTLHSAGG-------------------------------ILAQVYSPNMPPPL 1535

  Fly  1964 QQESEVSSAQYISSSSLSLSLGVGSSTGGGGGGAGGGDNHDKTADGKTITVLSNVLLTSSSVVSS 2028
            .|.|.:.....::..|:.|.|                                            
  Rat  1536 AQPSSIPPYALVNQPSVQLIL-------------------------------------------- 1556

  Fly  2029 SQHIPSISSPTPPSKKLTPLPKAGGSVASSSSGVGNIPTTSSGIGGTRNGSGLGNAGGSSNALDD 2093
                                             .|.:|              |.:.|.:.|.   
  Rat  1557 ---------------------------------QGTLP--------------LASCGAAQNL--- 1571

  Fly  2094 SFSMEIESPYSPGSADYEDLFEPPIPLEASRRAKGGATGGKVEIFDNLFGSSSPISNIRMTSRYN 2158
                   :|.            |.:|..||..|                   .|.:|   .|...
  Rat  1572 -------APV------------PTMPATASELA-------------------VPTTN---NSEER 1595

  Fly  2159 TAVGKKSNRTKADRKSKVKGARNPDFYDDVPNSATDLQNKDRLLRKLNRQERVVEEVKLVLKPYF 2223
            ||                           .|.:|.:...|:..::||:.|||.||||||.:||::
  Rat  1596 TA---------------------------TPKTAAEKTKKEEYMKKLHMQERAVEEVKLAIKPFY 1633

  Fly  2224 NKKAITKDDYKDIMRRAVPKICHSRSGEINPHKIKNLIDAYVRKFR--AKHKK 2274
            .|:.:||::||||:|:||.|||||:||||||.|:.||:.|||.|:|  .||||
  Rat  1634 QKREVTKEEYKDILRKAVQKICHSKSGEINPVKVANLVKAYVDKYRHMRKHKK 1686

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2926NP_649554.1 zf-RING_2 155..196 CDD:290367 24/40 (60%)
PHD_PHRF1 246..291 CDD:277011 26/44 (59%)
Phrf1XP_006230572.1 zf-RING_2 107..150 CDD:290367 25/42 (60%)
PHD_PHRF1 190..235 CDD:277011 26/44 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353501
Domainoid 1 1.000 218 1.000 Domainoid score I2584
eggNOG 1 0.900 - - E1_KOG0825
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 362 1.000 Inparanoid score I2123
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007147
OrthoInspector 1 1.000 - - oto97099
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12618
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6022
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.940

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