DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2926 and Scaf1

DIOPT Version :9

Sequence 1:NP_649554.1 Gene:CG2926 / 40676 FlyBaseID:FBgn0037344 Length:2296 Species:Drosophila melanogaster
Sequence 2:NP_001008422.1 Gene:Scaf1 / 233208 MGIID:2141980 Length:1256 Species:Mus musculus


Alignment Length:1651 Identity:352/1651 - (21%)
Similarity:525/1651 - (31%) Gaps:613/1651 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   787 PPPMPPASLPWNSPLFKITPLQQAPAKSNDGNQNDDVDNC-------------PNFSIYSQESQA 838
            ||...||..|   ..|.:..:|||...|..|:..:|.|..             |.....||||.|
Mouse    22 PPDRDPALSP---SAFILRAIQQAVGSSLQGDLPNDKDGARCRGLRWRRCCRSPRSEPRSQESGA 83

  Fly   839 VANASAMPSG------------------VPHGPADASDKDDDDMNEDLVQLDDDDEDTDIPLPL- 884
            ...|:.:.:.                  || ...|....:.:||.|.:.::...|.| .:|||: 
Mouse    84 ADTATVLDTAADSFLVELVSILDPPDTWVP-SRLDLQPGESEDMLELVAEVRIGDRD-PMPLPVP 146

  Fly   885 -------------------------------------GPEPEPVPEKV-------PKSSDD---- 901
                                                 ||.|.|.|...       |.||..    
Mouse   147 SLFPRLRAWRTGKTVSPQSHASRPACSRHLTLGTGDGGPAPPPAPSSASSSPSPSPSSSSPSPPP 211

  Fly   902 ---------------DLYEPENPTEEPEEPEMFEESCDAVPTEKSESSDHEPSNSNVQAAAPEEN 951
                           |:|:|.:||:|...|.         |..:.:....||:.||..::|    
Mouse   212 PPPPPPPPALPAPRFDIYDPFHPTDEAYSPP---------PAPEQKYDPFEPTGSNPSSSA---- 263

  Fly   952 DAEEARTRSTPSPLVKEDRAADRDRAKGVLE-----------LYDDSDWEELDIDKPKEFEKALL 1005
                    .|||| .:|:...:.:..:|:.:           :|||:   .|..|.|        
Mouse   264 --------GTPSP-EEEEEEEEEEEEEGLSQSISRISETLAGIYDDN---SLSQDFP-------- 308

  Fly  1006 TETEAQVSPKRAPSK--------RPPSKKDTSLE----RDVNESGSEHEQDRSYTPCLDEKNLAE 1058
                ...||:|.|..        .||....|..|    |.|...|.|.|      .|.:.|...|
Mouse   309 ----GDDSPRREPPPPQTLGAPGTPPQADSTRAEGAPRRRVFVLGPEAE------ACHEGKVSVE 363

  Fly  1059 EEEAGTTHQN---NVSTSPKTRSSKVSGDEDEPEKAVGTDIQSEDELNNENESPRRSRSRGTANN 1120
            ...||....:   ...|.|:....::...|:||..||     |........:.|....:..:...
Mouse   364 VVTAGAPALSLPPLPPTDPEIEEGEIVQPEEEPRVAV-----SLFRAARPRQPPASVATLASVAA 423

  Fly  1121 KKDKSKSRSKRNKGETFKKVGKRQKDRNYRG----DKSEPDRSPRPDSRSLTPKMRSKSPRVSKS 1181
            ......|..:..:|:.|..:   ..|.:..|    |..||...|..|:|.....:|.|.....:.
Mouse   424 PAAPPASAPRAPEGDDFLSL---HADSDGEGALQVDLGEPPAPPAADARWGGLDLRRKILTQRRE 485

  Fly  1182 ISRSRSGS----RSRCKSKSFSRSRSRSP----SRSRNRRRRNSRSKSYSRSHSRSRSRSNSHSR 1238
            ..|.||.|    .:|.|::. .|.||..|    |.|...::..||.:... |||.:|.||.|.||
Mouse   486 RYRQRSASPGPPPARKKARR-ERQRSGDPAPPDSPSWEAKKHRSRERKLG-SHSTARRRSRSRSR 548

  Fly  1239 QRFSFRGRDHQRGFFRGRGGLRLNYRNQQFHNRPFQHYGQNYHQNQNYHHQHNQHQNYFPPNQHG 1303
            :|...|..|      |.|||                      |::::...:..:.::..||....
Mouse   549 RRSRSRSAD------RRRGG----------------------HRSRSREKRRRRRRSASPPPAAS 585

  Fly  1304 QHQQYFQRPKRRELPRYDVRNVVGTSRHQTQAKDRYGRDAMRSHRSRSGRRNSRSFSRSVSRDSR 1368
            ....     .|||             ||             |..|...|::..:           
Mouse   586 SSSS-----SRRE-------------RH-------------RGKRREGGKKKKK----------- 608

  Fly  1369 VSLRSRSGSPKRRSFSMSPTPPPGTSPPPHKHGRGRQTSTNRRYARSPS---------------- 1417
               ||||.:.| ||..:...|   .|.||    .|....:.||.|..||                
Mouse   609 ---RSRSRAEK-RSGDLEKLP---ASVPP----SGSDRDSRRRGAVPPSIQDLTDHDLFAIKRTI 662

  Fly  1418 --PAPSPRNERATSPVQSVHSRRSRSHTPNRINGDGNRSSLYMGSPHYTPRISRSRSRSRSKSPK 1480
              ..|.....||.||..:|..:|...:....::.|                              
Mouse   663 TVGRPDKAEPRAPSPAPAVSPKREVLYDSEGLSAD------------------------------ 697

  Fly  1481 DMHKKKKKKSDKKKRRKRTGSSSPTTAARMRRISRQRDPFEDADDFLAPQRKRKKAGITTGQWSP 1545
                ::..||||.:||....|||.:        ||::.             .|:||         
Mouse   698 ----ERGGKSDKDRRRSGAASSSSS--------SREKG-------------SRRKA--------- 728

  Fly  1546 SPSPGRCDFLHDSALQDKNSSWTPPLGTPKGGHYNNDGGLTPKKTKRKRDKSKKKRKQHQLEKPR 1610
                                             .:.|.|       |.||:|.||      .:|.
Mouse   729 ---------------------------------LDGDRG-------RDRDRSSKK------TRPP 747

  Fly  1611 KEKKRKRRTQTPEPLPSKEVFASGNNILVSVSFNKESNTNNASATLSSQQQSVVTIPPGREDLLS 1675
            |:.     |....||| |...:||::         .|:::.:|..:..|.:..|.|..|      
Mouse   748 KDS-----TPGSGPLP-KAPPSSGSS---------SSSSSCSSRKVKLQSKVAVLIREG------ 791

  Fly  1676 NRMTSMTSMASMASNSNICSAVGAVKKTKRKRKKLEAKPVAIIDLERSPFQVHQE--PADVIVLT 1738
               .|.|:.|..:|:|.: .::|.  |..|.|:            .||||....|  ||:|..:.
Mouse   792 ---VSSTTPAKDSSSSGL-GSIGV--KFSRDRE------------SRSPFLKPDERAPAEVAKVA 838

  Fly  1739 DSEDATEPLSSRRERERDRDHELMRENGQREKTPQVGSLDAIMETSYENMTQSTGPKTPPEPPLV 1803
                   |.|::.::.:.:              .:.|:..|          :.|..||.|     
Mouse   839 -------PGSNKPKKTKAK--------------AKAGAKKA----------KGTKGKTKP----- 867

  Fly  1804 KFNLPTKKIQHKVRNNPLHEDVDDINSADELEA-SCSMAPAEQTPQHGHASHDGGQKIGPNTPPE 1867
                  .|.:.|||:...........|..:.:| |||.|.:.:..:....|.:......|:||| 
Mouse   868 ------SKTRKKVRSGGSSTASGGPGSLKKSKADSCSQAASAKGTEETSWSGEERTTKAPSTPP- 925

  Fly  1868 SGPCSPDAYDPFEPTKSPSLSPRSPTLTP-SQNLDQQTVSMPASGAIGPGSGDKGESDGAHVTGS 1931
                             |.::|..|.||| ||.:|....:...|......|.|.|...||.    
Mouse   926 -----------------PKVAPPPPALTPDSQTVDSSCKTPEVSFLPEEASEDTGVRVGAE---- 969

  Fly  1932 NASTNTQAQGNALNPVDLVMALMNKPNQSGSIQQESEVSSAQYISSSSLSLSLGVGSSTGGGGGG 1996
                                   .:..:....::|.|...|...::|:.:.:.....|.|...|.
Mouse   970 -----------------------EEEEEEEEEEEEEEQQPATTTATSTAAAAPSTAPSAGSTAGD 1011

  Fly  1997 AGGGDNHDKTADGKTITVLSNVLLTSSSVVSSSQHIPSISSPTPPSKKLTPLPKAGGSVASSSSG 2061
            :|       ..||....:               ..:|::    ||     |:|            
Mouse  1012 SG-------AEDGPAARI---------------SQLPTL----PP-----PMP------------ 1033

  Fly  2062 VGNIP-----TTSSGIGGTRNGSGLGNAGGSSNALDDSF---SMEIESPYSPGSADYEDLFEPPI 2118
             .|:|     |||..:..|.....:..|..:|.|.....   :.:|.|...|.|.    |...|.
Mouse  1034 -WNLPAGVDCTTSGVLALTALLFKMEEANLASRAKAQELIQATNQILSHRKPSST----LGVTPA 1093

  Fly  2119 PLEASRRAKGGATGGKVEIFDNLFGSSSPISNIRMTSRYNTAVGKKSNRTKADRKSKVKGARNPD 2183
            |:..|.....|.:       ..|...|.||.....|....|.:...|::.:....|:.:|     
Mouse  1094 PVPTSLGLPPGPS-------SYLLPGSLPIGGCGSTPPTPTGLAPASDKREGSSSSEGRG----- 1146

  Fly  2184 FYDDVPNSATDLQNKDRLLRKLNRQERVVEEVKLVLKPYFNKKAITKDDYKDIMRRAVPKICHSR 2248
                         :.|:.|:||:.|||.||||||.:|||:.||.|||::||||:|:||.|||||:
Mouse  1147 -------------DTDKYLKKLHTQERAVEEVKLAIKPYYQKKDITKEEYKDILRKAVHKICHSK 1198

  Fly  2249 SGEINPHKIKNLIDAYVRKFR--AKH 2272
            ||||||.|:.||:.|||:::|  .||
Mouse  1199 SGEINPVKVSNLVRAYVQRYRYFRKH 1224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2926NP_649554.1 zf-RING_2 155..196 CDD:290367
PHD_PHRF1 246..291 CDD:277011
Scaf1NP_001008422.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33 5/13 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 158..343 41/221 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 371..395 3/23 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 408..1030 183/969 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1112..1152 9/57 (16%)
Necessary for interaction with the CTD domain of POLR2A. /evidence=ECO:0000250 1131..1256 51/112 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1221..1256 2/4 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849824
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0825
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S8166
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
54.740

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