Sequence 1: | NP_649554.1 | Gene: | CG2926 / 40676 | FlyBaseID: | FBgn0037344 | Length: | 2296 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001008422.1 | Gene: | Scaf1 / 233208 | MGIID: | 2141980 | Length: | 1256 | Species: | Mus musculus |
Alignment Length: | 1651 | Identity: | 352/1651 - (21%) |
---|---|---|---|
Similarity: | 525/1651 - (31%) | Gaps: | 613/1651 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 787 PPPMPPASLPWNSPLFKITPLQQAPAKSNDGNQNDDVDNC-------------PNFSIYSQESQA 838
Fly 839 VANASAMPSG------------------VPHGPADASDKDDDDMNEDLVQLDDDDEDTDIPLPL- 884
Fly 885 -------------------------------------GPEPEPVPEKV-------PKSSDD---- 901
Fly 902 ---------------DLYEPENPTEEPEEPEMFEESCDAVPTEKSESSDHEPSNSNVQAAAPEEN 951
Fly 952 DAEEARTRSTPSPLVKEDRAADRDRAKGVLE-----------LYDDSDWEELDIDKPKEFEKALL 1005
Fly 1006 TETEAQVSPKRAPSK--------RPPSKKDTSLE----RDVNESGSEHEQDRSYTPCLDEKNLAE 1058
Fly 1059 EEEAGTTHQN---NVSTSPKTRSSKVSGDEDEPEKAVGTDIQSEDELNNENESPRRSRSRGTANN 1120
Fly 1121 KKDKSKSRSKRNKGETFKKVGKRQKDRNYRG----DKSEPDRSPRPDSRSLTPKMRSKSPRVSKS 1181
Fly 1182 ISRSRSGS----RSRCKSKSFSRSRSRSP----SRSRNRRRRNSRSKSYSRSHSRSRSRSNSHSR 1238
Fly 1239 QRFSFRGRDHQRGFFRGRGGLRLNYRNQQFHNRPFQHYGQNYHQNQNYHHQHNQHQNYFPPNQHG 1303
Fly 1304 QHQQYFQRPKRRELPRYDVRNVVGTSRHQTQAKDRYGRDAMRSHRSRSGRRNSRSFSRSVSRDSR 1368
Fly 1369 VSLRSRSGSPKRRSFSMSPTPPPGTSPPPHKHGRGRQTSTNRRYARSPS---------------- 1417
Fly 1418 --PAPSPRNERATSPVQSVHSRRSRSHTPNRINGDGNRSSLYMGSPHYTPRISRSRSRSRSKSPK 1480
Fly 1481 DMHKKKKKKSDKKKRRKRTGSSSPTTAARMRRISRQRDPFEDADDFLAPQRKRKKAGITTGQWSP 1545
Fly 1546 SPSPGRCDFLHDSALQDKNSSWTPPLGTPKGGHYNNDGGLTPKKTKRKRDKSKKKRKQHQLEKPR 1610
Fly 1611 KEKKRKRRTQTPEPLPSKEVFASGNNILVSVSFNKESNTNNASATLSSQQQSVVTIPPGREDLLS 1675
Fly 1676 NRMTSMTSMASMASNSNICSAVGAVKKTKRKRKKLEAKPVAIIDLERSPFQVHQE--PADVIVLT 1738
Fly 1739 DSEDATEPLSSRRERERDRDHELMRENGQREKTPQVGSLDAIMETSYENMTQSTGPKTPPEPPLV 1803
Fly 1804 KFNLPTKKIQHKVRNNPLHEDVDDINSADELEA-SCSMAPAEQTPQHGHASHDGGQKIGPNTPPE 1867
Fly 1868 SGPCSPDAYDPFEPTKSPSLSPRSPTLTP-SQNLDQQTVSMPASGAIGPGSGDKGESDGAHVTGS 1931
Fly 1932 NASTNTQAQGNALNPVDLVMALMNKPNQSGSIQQESEVSSAQYISSSSLSLSLGVGSSTGGGGGG 1996
Fly 1997 AGGGDNHDKTADGKTITVLSNVLLTSSSVVSSSQHIPSISSPTPPSKKLTPLPKAGGSVASSSSG 2061
Fly 2062 VGNIP-----TTSSGIGGTRNGSGLGNAGGSSNALDDSF---SMEIESPYSPGSADYEDLFEPPI 2118
Fly 2119 PLEASRRAKGGATGGKVEIFDNLFGSSSPISNIRMTSRYNTAVGKKSNRTKADRKSKVKGARNPD 2183
Fly 2184 FYDDVPNSATDLQNKDRLLRKLNRQERVVEEVKLVLKPYFNKKAITKDDYKDIMRRAVPKICHSR 2248
Fly 2249 SGEINPHKIKNLIDAYVRKFR--AKH 2272 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG2926 | NP_649554.1 | zf-RING_2 | 155..196 | CDD:290367 | |
PHD_PHRF1 | 246..291 | CDD:277011 | |||
Scaf1 | NP_001008422.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..33 | 5/13 (38%) | |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 158..343 | 41/221 (19%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 371..395 | 3/23 (13%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 408..1030 | 183/969 (19%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1112..1152 | 9/57 (16%) | |||
Necessary for interaction with the CTD domain of POLR2A. /evidence=ECO:0000250 | 1131..1256 | 51/112 (46%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1221..1256 | 2/4 (50%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167849824 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0825 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S8166 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
5 | 4.740 |