DRSC/TRiP Functional Genomics Resources

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Protein Alignment CRMP and CG6106

DIOPT Version :9

Sequence 1:NP_730954.2 Gene:CRMP / 40675 FlyBaseID:FBgn0023023 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_001285403.1 Gene:CG6106 / 32816 FlyBaseID:FBgn0030914 Length:486 Species:Drosophila melanogaster


Alignment Length:512 Identity:126/512 - (24%)
Similarity:197/512 - (38%) Gaps:103/512 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 IHLQSAQNRVYIKNGEIVNHDKSFKADVYIEDGIIKFVGPSSEITIPGGVRT----------IDA 67
            |.|........|..|.||:           .:|||:.|     :..|..|.|          .|.
  Fly    10 IFLGDGSQNALIHGGIIVD-----------TEGIIRRV-----LRSPQEVNTYLYNTESESVYDF 58

  Fly    68 SGLMIIPGGIDPHTHMQLPFGGAVAVDDFYHGTKAAVAGGTTMIIDFVLPNKHESMIEAYDKWR- 131
            ..|:::||.|||:.|:..|  |....:.|...||||.|||.|.|||.....:..::..|:.|.: 
  Fly    59 GDLVLMPGLIDPNVHINEP--GRKDWEGFATATKAAAAGGFTTIIDRPTNAQPPTVSVAHLKAKT 121

  Fly   132 SWADPKVCCDYGLHVGITWWSKSVSEEIGILCKELGVNSF--------------KTFMAYKGLYQ 182
            |.|..|:..|.|      :|...|......|...||....              :.|.|      
  Fly   122 STARGKIYVDVG------FWGGLVPGNGDQLAALLGAGVMGLQCTLCDPAAPVSQEFPA------ 174

  Fly   183 LNDSDLLDVFERIRHLNGVAMVHAENGDIIAKNTQRLLAEGINGPEGHE-------LSRPEEVEA 240
            :|:|.|.:.      |:.:....||...|:|.:.:..|...|:..|...       ::||.::|.
  Fly   175 VNESQLEEA------LSQLDKDQAEGEAIVAVHAELPLTTEIHPDEEAPREYGTFLVTRPPQMEI 233

  Fly   241 EAVHRACVLAHQADCPLYVVHVMSKSAGIELARARHRYRGRYIMGETLAAALGTDATCCQHLGFD 305
            .|....|.||::.  |...:|:::.|:|..|.......|    .|..|     |..||..:|...
  Fly   234 SATQLLCRLANRH--PRRCIHILNCSSGESLPLVEECRR----QGGNL-----TVDTCPHYLALA 287

  Fly   306 AE------AAHVLSPPLRPDKTTPEFLMKLLANDDLQLTGSDNCTFNKEHKAL----GKGDFTKI 360
            ||      ......||:|..:...:....|.....:::.|||:.......:||    |:|:|.|.
  Fly   288 AEDVPDCGTEFKTWPPIRERRNQEQLWQALRPGGAIRMIGSDHSPATPGARALTCGRGRGNFLKA 352

  Fly   361 PNGVNGVEDRMSLVW-----EKG-VHAGLLDPCRFVAVTSTNAAKIFNIYPQKGRIAVGSDADIV 419
            ..|:|.::..:|:||     .:| .:..:.|..|.:.   ...|.:..:...|||||.|.|||..
  Fly   353 WPGINSLQLSLSVVWTAAANRRGSANLTIADIHRLMC---QEPANLCGLSASKGRIAEGYDADFC 414

  Fly   420 IWNPNATRTISKDTHHHACDFNIFEGMTVHGVCEFVLVRGRICAERGNVRVAEGFGR 476
            :|:|....|:..:..:.|.....:.|..:.||....:|||....::     .||||:
  Fly   415 VWSPEEEFTVGPELLYTATKATPYAGQKLRGVVHATVVRGLHVYQQ-----FEGFGQ 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CRMPNP_730954.2 D-HYD 22..475 CDD:238639 122/500 (24%)
PRK09060 24..483 CDD:181632 124/501 (25%)
CG6106NP_001285403.1 L-HYD_ALN 2..473 CDD:238640 126/512 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442128
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0044
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.917438 Normalized mean entropy S1869
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D719800at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.700

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