DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CRMP and dhp-2

DIOPT Version :9

Sequence 1:NP_730954.2 Gene:CRMP / 40675 FlyBaseID:FBgn0023023 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_501797.1 Gene:dhp-2 / 177852 WormBaseID:WBGene00000964 Length:520 Species:Caenorhabditis elegans


Alignment Length:569 Identity:292/569 - (51%)
Similarity:364/569 - (63%) Gaps:57/569 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 IKNGEIVNHDKSFKADVYIEDGIIKFVGPSSEITIPGGVRTIDASGLMIIPGGIDPHTHMQLPFG 88
            ||||.|||.|..||:||.:.||.|..:.||.:.|  .|:..:||:..::|||||||||||||||.
 Worm     5 IKNGTIVNDDAIFKSDVLVLDGRIVEIAPSIQPT--PGLEVVDATDRLVIPGGIDPHTHMQLPFM 67

  Fly    89 GAVAVDDFYHGTKAAVAGGTTMIIDFVLPNKHESMIEAYDKWRSWADPKVCCDYGLHVGITWWSK 153
            |.:|.|||:.||:||||||||||||||:|.|.||::.|||:||.||||||.|||||.:.||.|..
 Worm    68 GEIAKDDFHRGTEAAVAGGTTMIIDFVIPTKGESLLVAYDRWRGWADPKVVCDYGLSMAITSWGP 132

  Fly   154 SVSEEIGILC-KELGVNSFKTFMAYKGLYQLNDSDLLDVFERIRHLNGVAMVHAENGDIIAKNTQ 217
            .:::|:.|:. .|.|:||||.|:||.|::.:.|.:......:...|..:|.||||||.:||:..:
 Worm   133 EIAKEMEIVTGAEYGINSFKFFLAYAGVFMVRDEEFYQGMIQCAKLRALARVHAENGSVIAERCE 197

  Fly   218 RLLAEGINGPEGHELSRPEEVEAEAVHRACVLAHQADCPLYVVHVMSKSAGIELARARHRYRGRY 282
            .||:.||.|||||..|||||:||||..|||.:|.||:|||||||||||  |...|.|.||.:|..
 Worm   198 HLLSSGITGPEGHTQSRPEELEAEATFRACTMASQANCPLYVVHVMSK--GAAAAIAHHRKKGAV 260

  Fly   283 IMGETLAAALGTDATCCQHLGFDAEAAHVLSPPLRPDKTTPEFLMKLLANDDLQLTGSDNCTFNK 347
            :.||.:||.|.||.:...:..:...|.:|:||||..|.:||..||||||..:|.||.:|||||:.
 Worm   261 VFGEPIAAGLATDGSHYYNEDWLHAARYVMSPPLSRDPSTPSALMKLLAAGELHLTATDNCTFDC 325

  Fly   348 EHKALGKGDFTKIPNGVNGVEDRMSLVWEKGVHAGLLDPCRFVAVTSTNAAKIFNIYPQKGRIAV 412
            :.|:|||.|||||||||||||||||:||:||||||::||.||||||||.||||||.|||||||||
 Worm   326 QQKSLGKDDFTKIPNGVNGVEDRMSVVWDKGVHAGIIDPMRFVAVTSTMAAKIFNCYPQKGRIAV 390

  Fly   413 GSDADIVIWNPNATRTISKDTHHHACDFNIFEGMTVHGVCEFVLVRGRICAERGNVRVAEGFGRF 477
            ||||||||||.||||||||||||||.||||||||.||||.|..:.|||.....|.::..:|.|:|
 Worm   391 GSDADIVIWNANATRTISKDTHHHAIDFNIFEGMQVHGVPEITISRGRTVWANGQLKTVQGSGQF 455

  Fly   478 IPTPVRPPFVYDIIEGKVQSQPEEQHEEKQNGSMAKRFAELDIQIPVQEPISAMLAGNLAMPAEG 542
            ||.......|:..::.:.::                           .||:...     .:|.|.
 Worm   456 IPLAPDSQIVFSAVDNRKKA---------------------------MEPVKID-----RIPYEP 488

  Fly   543 SLCSTPSVRGRVDGKRDLQESSFSISEELDRSGVRACIKVKNPPGGKSS 591
            |...||.....:                :.::.|||.|    ||||.||
 Worm   489 SALQTPDANANI----------------VVKAPVRAAI----PPGGASS 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CRMPNP_730954.2 D-HYD 22..475 CDD:238639 270/451 (60%)
PRK09060 24..483 CDD:181632 274/459 (60%)
dhp-2NP_501797.1 D-HYD 3..453 CDD:238639 270/451 (60%)
PRK09060 3..446 CDD:181632 269/444 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157446
Domainoid 1 1.000 503 1.000 Domainoid score I172
eggNOG 1 0.900 - - E1_COG0044
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H20359
Inparanoid 1 1.050 553 1.000 Inparanoid score I611
Isobase 1 0.950 - 0.917438 Normalized mean entropy S1869
OMA 1 1.010 - - QHG54576
OrthoDB 1 1.010 - - D174151at33208
OrthoFinder 1 1.000 - - FOG0000315
OrthoInspector 1 1.000 - - otm14670
orthoMCL 1 0.900 - - OOG6_100676
Panther 1 1.100 - - LDO PTHR11647
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5547
SonicParanoid 1 1.000 - - X218
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1817.750

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