DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CRMP and CRMP1

DIOPT Version :9

Sequence 1:NP_730954.2 Gene:CRMP / 40675 FlyBaseID:FBgn0023023 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_001014809.1 Gene:CRMP1 / 1400 HGNCID:2365 Length:686 Species:Homo sapiens


Alignment Length:595 Identity:282/595 - (47%)
Similarity:389/595 - (65%) Gaps:35/595 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PKPVKKVPIHLQSAQ-NRVYIKNGEIVNHDKSFKADVYIEDGIIKFVGPSSEITIPGGVRTIDAS 68
            |.| :.:|:...:.| :|:.||.|.|:|.|:|..||||:|||:||.:|  ..:.:||||:||:|:
Human   114 PAP-RDLPLGRDNGQSDRLLIKGGRIINDDQSLYADVYLEDGLIKQIG--ENLIVPGGVKTIEAN 175

  Fly    69 GLMIIPGGIDPHTHMQLPFGGAVAVDDFYHGTKAAVAGGTTMIIDFVLPNKHESMIEAYDKWRSW 133
            |.|:||||||.:|::|.|..|..|.|||:.||:||:.||||||||.|:|....|::.:::||...
Human   176 GRMVIPGGIDVNTYLQKPSQGMTAADDFFQGTRAALVGGTTMIIDHVVPEPGSSLLTSFEKWHEA 240

  Fly   134 ADPKVCCDYGLHVGITWWSKSVSEEIGILCKELGVNSFKTFMAYKGLYQLNDSDLLDVFERIRHL 198
            ||.|.||||.|||.||.|...|.||:.:|.::.|||||:.:||||.:||::||.|.:.|..::.|
Human   241 ADTKSCCDYSLHVDITSWYDGVREELEVLVQDKGVNSFQVYMAYKDVYQMSDSQLYEAFTFLKGL 305

  Fly   199 NGVAMVHAENGDIIAKNTQRLLAEGINGPEGHELSRPEEVEAEAVHRACVLAHQADCPLYVVHVM 263
            ..|.:|||||||:||:..:|:|..||.|||||.||||||:|||||.||..:|.:.:||:|:..||
Human   306 GAVILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRAITIAGRINCPVYITKVM 370

  Fly   264 SKSAGIELARARHRYRGRYIMGETLAAALGTDATCCQHLGFDAEAAHVLSPPLRPDKTTPEFLMK 328
            ||||...:|.||.  :|..:.||.:||:||||.|......:...||.|.||||.||.|||::|..
Human   371 SKSAADIIALARK--KGPLVFGEPIAASLGTDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYLTS 433

  Fly   329 LLANDDLQLTGSDNCTFNKEHKALGKGDFTKIPNGVNGVEDRMSLVWEKGVHAGLLDPCRFVAVT 393
            |||..|||:|||.:|.::...||:||.:||.||.||||:|:||::||:|.|..|.:|..:|||||
Human   434 LLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVNGIEERMTVVWDKAVATGKMDENQFVAVT 498

  Fly   394 STNAAKIFNIYPQKGRIAVGSDADIVIWNPNATRTISKDTHHHACDFNIFEGMTVHGVCEFVLVR 458
            |||||||||:||:|||||||||||:|||:|:..:||:..:|..|.::||||||..||....|:.:
Human   499 STNAAKIFNLYPRKGRIAVGSDADVVIWDPDKLKTITAKSHKSAVEYNIFEGMECHGSPLVVISQ 563

  Fly   459 GRICAERGNVRVAEGFGRFIPTPVRPPFVYDIIEGKVQSQPEEQHEEKQNGSMAKRFAELDIQIP 523
            |:|..|.||:.|.:|.|||||....|..:|..:  |:::        |..|.........|  .|
Human   564 GKIVFEDGNINVNKGMGRFIPRKAFPEHLYQRV--KIRN--------KVFGLQGVSRGMYD--GP 616

  Fly   524 VQE-PISAMLAGNLAMPAEGSLCSTPSVRGRVDGKRDLQESSFSIS-EELD-----RSGVRACIK 581
            |.| |.:.    ..|.||. |..|:|| :.:....|:|.:|:||:| .::|     |:|.|    
Human   617 VYEVPATP----KYATPAP-SAKSSPS-KHQPPPIRNLHQSNFSLSGAQIDDNNPRRTGHR---- 671

  Fly   582 VKNPPGGKSS 591
            :..||||:|:
Human   672 IVAPPGGRSN 681

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CRMPNP_730954.2 D-HYD 22..475 CDD:238639 240/452 (53%)
PRK09060 24..483 CDD:181632 245/458 (53%)
CRMP1NP_001014809.1 PRK09060 131..581 CDD:181632 240/453 (53%)
D-HYD 131..580 CDD:238639 240/452 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 520 1.000 Domainoid score I304
eggNOG 1 0.900 - - E1_COG0044
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 571 1.000 Inparanoid score I1054
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54576
OrthoDB 1 1.010 - - D174151at33208
OrthoFinder 1 1.000 - - FOG0000315
OrthoInspector 1 1.000 - - otm40339
orthoMCL 1 0.900 - - OOG6_100676
Panther 1 1.100 - - O PTHR11647
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X218
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1211.880

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