DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2931 and AT3G04500

DIOPT Version :10

Sequence 1:NP_649552.1 Gene:CG2931 / 40673 FlyBaseID:FBgn0037342 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_187100.1 Gene:AT3G04500 / 819606 AraportID:AT3G04500 Length:245 Species:Arabidopsis thaliana


Alignment Length:257 Identity:101/257 - (39%)
Similarity:143/257 - (55%) Gaps:52/257 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 AANTYQNSQHKLQHHQGNGGSRLTVPPPPMPPPPTFMSTFVPTGSGGGSSKAMSATPVVLSSAPK 102
            |||:|.::.::              ||.|....|:                  .|.|..::|.|.
plant    21 AANSYYSAPYQ--------------PPQPYAAAPS------------------PAVPAPVASIPG 53

  Fly   103 LYQCRQSV-HVPTVAAAPSIDINAVSFDVTQKLKKLKAEKSGPNPIAEEAIKAARASSALQSFQT 166
            .....|.| .||.|.|.|       .:....:|.:..|:...|.  |.|.:|||.|||      .
plant    54 ATVYPQPVGPVPAVYAYP-------QYQQAHQLFQRDAQTITPE--ALENVKAALASS------E 103

  Fly   167 TERKKKDRKTV--RIAGGTVWEDTSLADWPDDDFRIFCGDLGNDVNDEVLTRTFNKFPSFQRARV 229
            ||.|.:.:|..  |.|.|..|||.:|::||::|:|:|||||||:|||:||::.|.:||:|..|:|
plant   104 TEHKAETKKRAIPRKAAGQSWEDPTLSEWPENDYRLFCGDLGNEVNDDVLSKAFARFPTFNMAKV 168

  Fly   230 VRDKRTGKSKGFGFVSFREPADFIRAMKEMDGRYVGSRPIKLRKSTWRQRSLDVVKKKEREK 291
            :|||||||:||:|||||..|||...|:|||:|:|||:||||||||:|::|:..  :..||:|
plant   169 IRDKRTGKTKGYGFVSFLNPADLAAALKEMNGKYVGNRPIKLRKSSWKERTDQ--EAAERQK 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2931NP_649552.1 RRM_RBM42 192..274 CDD:409817 53/81 (65%)
AT3G04500NP_187100.1 RRM_RBM42 131..213 CDD:409817 53/81 (65%)

Return to query results.
Submit another query.