DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2931 and AT3G04500

DIOPT Version :9

Sequence 1:NP_649552.1 Gene:CG2931 / 40673 FlyBaseID:FBgn0037342 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_187100.1 Gene:AT3G04500 / 819606 AraportID:AT3G04500 Length:245 Species:Arabidopsis thaliana


Alignment Length:257 Identity:101/257 - (39%)
Similarity:143/257 - (55%) Gaps:52/257 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 AANTYQNSQHKLQHHQGNGGSRLTVPPPPMPPPPTFMSTFVPTGSGGGSSKAMSATPVVLSSAPK 102
            |||:|.::.::              ||.|....|:                  .|.|..::|.|.
plant    21 AANSYYSAPYQ--------------PPQPYAAAPS------------------PAVPAPVASIPG 53

  Fly   103 LYQCRQSV-HVPTVAAAPSIDINAVSFDVTQKLKKLKAEKSGPNPIAEEAIKAARASSALQSFQT 166
            .....|.| .||.|.|.|       .:....:|.:..|:...|.  |.|.:|||.|||      .
plant    54 ATVYPQPVGPVPAVYAYP-------QYQQAHQLFQRDAQTITPE--ALENVKAALASS------E 103

  Fly   167 TERKKKDRKTV--RIAGGTVWEDTSLADWPDDDFRIFCGDLGNDVNDEVLTRTFNKFPSFQRARV 229
            ||.|.:.:|..  |.|.|..|||.:|::||::|:|:|||||||:|||:||::.|.:||:|..|:|
plant   104 TEHKAETKKRAIPRKAAGQSWEDPTLSEWPENDYRLFCGDLGNEVNDDVLSKAFARFPTFNMAKV 168

  Fly   230 VRDKRTGKSKGFGFVSFREPADFIRAMKEMDGRYVGSRPIKLRKSTWRQRSLDVVKKKEREK 291
            :|||||||:||:|||||..|||...|:|||:|:|||:||||||||:|::|:..  :..||:|
plant   169 IRDKRTGKTKGYGFVSFLNPADLAAALKEMNGKYVGNRPIKLRKSSWKERTDQ--EAAERQK 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2931NP_649552.1 RRM_RBM42 192..274 CDD:240829 53/81 (65%)
RRM <194..>280 CDD:223796 55/85 (65%)
AT3G04500NP_187100.1 RRM 64..>242 CDD:223796 87/182 (48%)
RRM_RBM42 131..213 CDD:409817 53/81 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 110 1.000 Domainoid score I2114
eggNOG 1 0.900 - - E1_KOG0226
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 166 1.000 Inparanoid score I1579
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1249623at2759
OrthoFinder 1 1.000 - - FOG0005503
OrthoInspector 1 1.000 - - oto4147
orthoMCL 1 0.900 - - OOG6_103065
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3922
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.730

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