Sequence 1: | NP_649552.1 | Gene: | CG2931 / 40673 | FlyBaseID: | FBgn0037342 | Length: | 302 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001163754.3 | Gene: | trv / 43362 | FlyBaseID: | FBgn0085391 | Length: | 651 | Species: | Drosophila melanogaster |
Alignment Length: | 315 | Identity: | 81/315 - (25%) |
---|---|---|---|
Similarity: | 120/315 - (38%) | Gaps: | 113/315 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 23 PARN-LFVP-----NQVRPIIAANTYQNSQHKL--QH------------HQGNGGSRLTVPPPPM 67
Fly 68 PPPPTFMSTFVPTGSGGGSSKAMSATPVVLSS---APKLYQCRQSVHVPTVAAAPSIDINAVSFD 129
Fly 130 VTQKLKKLKA---------EKSGPNPIAEEAIKAARASSALQSFQT----------------TER 169
Fly 170 KKKDRKTVRIAGGTVWEDTSLADWPDDD----------FRIFCGDLGNDVNDEVLTRTFNKFPSF 224
Fly 225 QRARVVRDKRTGKSKGFGFVSFREPADFIRAMKEMDGRYVGSRPIKLRKSTWRQR 279 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG2931 | NP_649552.1 | RRM_RBM42 | 192..274 | CDD:240829 | 32/91 (35%) |
RRM | <194..>280 | CDD:223796 | 34/96 (35%) | ||
trv | NP_001163754.3 | RRM2_TIA1_like | 313..387 | CDD:240799 | 30/76 (39%) |
RRM3_TIA1_like | 416..491 | CDD:240800 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S1221 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.860 |