DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2931 and Rbp6

DIOPT Version :10

Sequence 1:NP_649552.1 Gene:CG2931 / 40673 FlyBaseID:FBgn0037342 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_001097631.1 Gene:Rbp6 / 39919 FlyBaseID:FBgn0260943 Length:499 Species:Drosophila melanogaster


Alignment Length:153 Identity:38/153 - (24%)
Similarity:59/153 - (38%) Gaps:39/153 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 ETRPLPRIEYGRSPSREKMTD-LRDELFHAKKKVASYETDLKKLSTEMQRLRRDAEKRETFLERI 152
            |.:|.|..| ||.|...|..| |||..   .|::...:.|:..|| ....|.|..:.|..| |..
  Fly   120 EDKPQPPPE-GRLPDATKGCDHLRDVF---AKQMGLSDKDIVALS-GAHTLGRCHKDRSGF-EGA 178

  Fly   153 VTAQYHPTELNDTNLARTLTSIKRKEMAKENLIDIQAKELERLRSLLKDSHI-PLGSKHPTETMT 216
            .|:  :|...:::.....|:.      .||.|:.:.:.     ::||.|... ||..|:..:   
  Fly   179 WTS--NPLIFDNSYFKELLSG------EKEGLLQLVSD-----KALLDDPVFRPLVEKYAAD--- 227

  Fly   217 VSVAKDSELDVDNED--YSDYPE 237
                         ||  ::||.|
  Fly   228 -------------EDAFFADYAE 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2931NP_649552.1 RRM_RBM42 192..274 CDD:409817 11/49 (22%)
Rbp6NP_001097631.1 RRM1_MSI 30..105 CDD:409990
RRM2_MSI 119..192 CDD:240769 23/79 (29%)
Blue background indicates that the domain is not in the aligned region.

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