Sequence 1: | NP_649552.1 | Gene: | CG2931 / 40673 | FlyBaseID: | FBgn0037342 | Length: | 302 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001014181.2 | Gene: | Rbm42 / 361545 | RGDID: | 1306184 | Length: | 478 | Species: | Rattus norvegicus |
Alignment Length: | 446 | Identity: | 133/446 - (29%) |
---|---|---|---|
Similarity: | 186/446 - (41%) | Gaps: | 157/446 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 GTKR-RNIEDELSRFEAEISKPPARNL-----FVPN----------QVRPIIAANTYQNSQ---- 46
Fly 47 ---------------------------------------------------------------HK 48
Fly 49 LQH--------------------HQGNGGSRLTVPP-PPMPPPPTFMSTFVPTGS---------- 82
Fly 83 -------------------------GGGSSKAMSATPVVLSSAPKLYQCRQSVHVPTVAAA---- 118
Fly 119 -PSIDINAVSFDVTQ---------KLKKLKAEKSGPNPIAEEAIKAARASSALQSFQTTERKKKD 173
Fly 174 RKTVRIAGGTVWEDTSLADWPDDDFRIFCGDLGNDVNDEVLTRTFNKFPSFQRARVVRDKRTGKS 238
Fly 239 KGFGFVSFREPADFIRAMKEMDGRYVGSRPIKLRKSTWRQRSLDVVKKKEREKQVL 294 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG2931 | NP_649552.1 | RRM_RBM42 | 192..274 | CDD:240829 | 57/81 (70%) |
RRM | <194..>280 | CDD:223796 | 59/85 (69%) | ||
Rbm42 | NP_001014181.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..33 | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 171..209 | 11/37 (30%) | |||
Necessary for interaction with HNRNPK. /evidence=ECO:0000269|PubMed:19170760 | 234..478 | 96/246 (39%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 317..354 | 5/36 (14%) | |||
RRM_RBM42 | 373..455 | CDD:409817 | 57/81 (70%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 121 | 1.000 | Domainoid score | I5580 |
eggNOG | 1 | 0.900 | - | - | E1_KOG0226 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 223 | 1.000 | Inparanoid score | I3439 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1249623at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0005503 | |
OrthoInspector | 1 | 1.000 | - | - | oto97489 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103065 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR24012 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X3922 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
13 | 12.830 |