Protein Alignment CG2931 and Caper

DIOPT Version :10

• Sequence 1: NP_649552.1
• Gene: CG2931 / 40673
• FlyBaseID: FBgn0037342
• Length: 302
• Species: Drosophila melanogaster
• Sequence 2: NP_609095.1
• Gene: Caper / 33989
• FlyBaseID: FBgn0031883
• Length: 594
• Species: Drosophila melanogaster
• Alignment Length: 301
• Identity: 56/301 - (18%)
• Similarity: 111/301 - (36%)
• Gaps: 57/301 - (18%)

  Fly     2 GTKRRNIEDELSRFEAEISKPPARNLFVPNQVRPIIAANTYQNSQHKLQHHQGNGGSRLTVPPPP 66
            |:|...::....:.....|:...|....|.:.|    ..::..|:.:....:|....|...||
  Fly   160 GSKSLQVDRSRDKRRRSRSRDQQRKRLSPIRER----KRSHSRSRDRNSRRRGTNSPRRRSPP-- 218

  Fly    67 MPPPPTFMSTFVPTGSGGGSSKAMSATPVVLSSAPK------LYQCRQSVHVPTV-----AAAPS 120
                             .|:.:   .||..||...:      ..|..|.|....:     :....
  Fly   219 -----------------NGADR---TTPTELSPEERDARTVFCIQLSQRVRARDLEEFFSSVGKV 263

  Fly   121 IDINAVSFDVTQKLKKLK-AEKSGPNPIA-EEAIKAARASSALQSFQTTERKKKDRKTVRIAGGT 183
            .|:..::.:.|::.|.:. .|...|..:| ...:...|........|.|:.:|.     |:
  Fly   264 RDVRLITCNKTKRFKGIAYIEFDDPESVALALGLSGQRLLGVPIMVQHTQAEKN-----RL---- 319

  Fly   184 VWEDTSLADWPDD---DFRIFCGDLGNDVNDEVLTRTFNKFPSFQRARVVRDKRTGKSKGFGFVS 245
              ::.:.|..|..   ..|::.|.|..::.:::|...|..|......:::.|..||:|||:||::
  Fly   320 --QNAAPAFQPKSHTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFIT 382

  Fly   246 FREPADFIRAMKEMDGRYVGSRPIKLRKSTWR----QRSLD 282
            :....|..:|:::::|..:..|.:|:...|.|    ..|||
  Fly   383 YHNADDAKKALEQLNGFELAGRLMKVGNVTERLDMNTTSLD 423

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG2931	NP_649552.1	RRM_RBM42	192..274	CDD:409817	20/84 (24%)
Caper	NP_609095.1	SF-CC1	213..578	CDD:273721	48/244 (20%)