DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12746 and pgpB

DIOPT Version :10

Sequence 1:NP_649551.4 Gene:CG12746 / 40672 FlyBaseID:FBgn0037341 Length:363 Species:Drosophila melanogaster
Sequence 2:NP_415794.1 Gene:pgpB / 945863 ECOCYCID:EG10705 Length:254 Species:Escherichia coli


Alignment Length:233 Identity:54/233 - (23%)
Similarity:82/233 - (35%) Gaps:90/233 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 EELWLYKNPRRPDIVRGGELLFWV---IVAPF-LVT--IAFYWYTRDRRDFRAASWAWTL----- 154
            |:.||.|            ..|||   :..|: ::|  |.|.|:....| ||..: |:.|     
E. coli    33 EQSWLLK------------AAFWVTETVTQPWGVITHLILFGWFLWCLR-FRIKA-AFVLFAILA 83

  Fly   155 -ALCMNGIPTSVLKITVGRPRP-------------DYFYRCFPDGVMVLNTTSNG--VDTSILDF 203
             |:.:.....|.:|..|..|||             |.||        .|.....|  |...:.:.
E. coli    84 AAILVGQGVKSWIKDKVQEPRPFVIWLEKTHHIPVDEFY--------TLKRAERGNLVKEQLAEE 140

  Fly   204 NCTGLPGDI-----NEGRKSFPSGHSSFAFASFGFIAYYIGAKLHAFDSRGRGHTW----RLCIA 259
            .  .:|..:     .|...:|||||:.|| ||:..:|.              |..|    .|.||
E. coli   141 K--NIPQYLRSHWQKETGFAFPSGHTMFA-ASWALLAV--------------GLLWPRRRTLTIA 188

  Fly   260 VIPLFIA------LLVAVSRTCDYHHHW-QDVTIGGLI 290
            ::.::..      ||:.:        || :|:.:..||
E. coli   189 ILLVWATGVMGSRLLLGM--------HWPRDLVVATLI 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12746NP_649551.4 PAP2_containing_1_like 104..302 CDD:239484 53/230 (23%)
pgpBNP_415794.1 PRK10699 1..244 CDD:182658 54/233 (23%)

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