DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG12746 and LPP4

DIOPT Version :9

Sequence 1:	NP_649551.4	Gene:	CG12746 / 40672	FlyBaseID:	FBgn0037341	Length:	363	Species:	Drosophila melanogaster
Sequence 2:	NP_566602.1	Gene:	LPP4 / 821350	AraportID:	AT3G18220	Length:	308	Species:	Arabidopsis thaliana

Alignment Length:	293	Identity:	96/293 - (32%)
Similarity:	145/293 - (49%)	Gaps:	29/293 - (9%)

- Green bases have known domain annotations that are detailed below.

  Fly    74 DVVLRVLLVITFFKLETMTAFKREIHEEELWLYKNPRRPDIVRGGELLFWVIVAPFLVTIAFYWY 138
            |.::.|:|.:....|..:..|.|.|..:.|.....|...|.:....:....|:.|..:.|.:|:|
plant    25 DWLILVVLGLIDIVLNVIEPFHRYIGPDMLTDLTFPFYEDTIPMWAVPIICILVPICIFIVYYYY 89

  Fly   139 TRDRRDFRAASWAWTLALCMNGIPTSVLKITVGRPRPDYFYRCFPDGVMVLNTTSNGVDTSILDF 203
            .||..|...|......:..:.|:.|..:|..||||||::||||||:|....:.     ||.  |.
plant    90 RRDVYDLHHAILGIGFSCLVTGVTTDSIKDAVGRPRPNFFYRCFPNGKPKFHP-----DTK--DV 147

  Fly   204 NCTGLPGDINEGRKSFPSGHSSFAFASFGFIAYYIGAKLHAFDSRGRGHTWRLCIAVIPLFIALL 268
            .|.|:...|.||.|||||||:|::||...|:|:|:..|:..||.  |||..:||:..:|:.|::|
plant   148 VCHGVKKIIKEGYKSFPSGHTSWSFAGLTFLAWYLSGKIKVFDR--RGHVAKLCLVFLPILISIL 210

  Fly   269 VAVSRTCDYHHHWQDVTIGGLIGLFAGYISYTQYYP-----SIFCPDAGIPLVRWPS-------- 320
            :.:||..||.|||.||..|.:||:|....||..::|     :.:.|.|...::...|
plant   211 IGISRVDDYWHHWTDVFAGAIIGIFVASFSYLHFFPYPYDENGWAPHAYFRMLAERSTGRATTMT 275

  Fly   321 REGSQYQRLSGKD---DNGSRGPH--HLDGGDA 348
            |.||  :.:.|.|   .|.:..||  |.:..|:
plant   276 RTGS--RGMLGNDVEPGNSASSPHDRHRESTDS 306

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG12746	NP_649551.4	PAP2_containing_1_like	104..302	CDD:239484	74/197 (38%)
LPP4	NP_566602.1	PgpB	23..246	CDD:223743	82/229 (36%)
LPP4	NP_566602.1	PAP2_containing_1_like	55..244	CDD:239484	74/197 (38%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	145	1.000	Domainoid score	I1473
eggNOG	1	0.900	-	-		E1_COG0671
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	174	1.000	Inparanoid score	I1509
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1621899at2759
OrthoFinder	1	1.000	-	-		FOG0001532
OrthoInspector	1	1.000	-	-		otm2573
orthoMCL	1	0.900	-	-		OOG6_100228
Panther	1	1.100	-	-	O	PTHR10165
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X622
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	12	11.830