DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12746 and PAP1

DIOPT Version :9

Sequence 1:NP_649551.4 Gene:CG12746 / 40672 FlyBaseID:FBgn0037341 Length:363 Species:Drosophila melanogaster
Sequence 2:NP_001323948.1 Gene:PAP1 / 814646 AraportID:AT2G01180 Length:330 Species:Arabidopsis thaliana


Alignment Length:346 Identity:90/346 - (26%)
Similarity:151/346 - (43%) Gaps:63/346 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KEGQESRRTLSDSSAEDVRNTGSRTRTNDDEMWRNELAMNTDSSSVQPEKREERSHRTGNSNAKL 69
            :|.|..|....|.|...:::.|.|..:.....|                                
plant    22 QEAQRGRMQEIDLSVHTIKSHGGRVASKHKHDW-------------------------------- 54

  Fly    70 SDAVDVVLRVLLVITFFKLETMTAFKREIHEEELWLYKNPRRPDIVRGGELLFWVIVAPFLVTIA 134
                  ::.|:|:.....|..::.|.|.:.::.:...|.|.:.:.|....:..:.::.|.:|.:.
plant    55 ------IILVILIAIEIGLNLISPFYRYVGKDMMTDLKYPFKDNTVPIWSVPVYAVLLPIIVFVC 113

  Fly   135 FYWYTRDRRDFRAASWAWTLALCMNGIPTSVLKITVGRPRPDYFYRCFPDGVMVLNTTSNGVDTS 199
            ||.......|...:......|:.:.|:.|..:|:..|||||::::||||||..:.:.....|   
plant   114 FYLKRTCVYDLHHSILGLLFAVLITGVITDSIKVATGRPRPNFYWRCFPDGKELYDALGGVV--- 175

  Fly   200 ILDFNCTGLPGDINEGRKSFPSGHSSFAFASFGFIAYYIGAKLHAFDSRGRGHTWRLCIAVIPLF 264
                 |.|...::.||.|||||||:|::||...|::.|:..|:.||::  .||..:||:.:.||.
plant   176 -----CHGKAAEVKEGHKSFPSGHTSWSFAGLTFLSLYLSGKIKAFNN--EGHVAKLCLVIFPLL 233

  Fly   265 IALLVAVSRTCDYHHHWQDVTIGGLIGLFAGYISYTQYYPSIF-------------CPDAGIPLV 316
            .|.||.:||..||.||||||..|.|||.......|.|:||:.:             ..:.|:|:.
plant   234 AACLVGISRVDDYWHHWQDVFAGALIGTLVAAFCYRQFYPNPYHEEGWGPYAYFKAAQERGVPVT 298

  Fly   317 RWPSREGSQYQRLSGKDDNGS 337
              .|:.|...:.:|.:.|:.|
plant   299 --SSQNGDALRAMSLQMDSTS 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12746NP_649551.4 PAP2_containing_1_like 104..302 CDD:239484 67/197 (34%)
PAP1NP_001323948.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 145 1.000 Domainoid score I1473
eggNOG 1 0.900 - - E1_COG0671
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H100569
Inparanoid 1 1.050 174 1.000 Inparanoid score I1509
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1621899at2759
OrthoFinder 1 1.000 - - FOG0001532
OrthoInspector 1 1.000 - - otm2573
orthoMCL 1 0.900 - - OOG6_100228
Panther 1 1.100 - - O PTHR10165
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X622
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.830

Return to query results.
Submit another query.