DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12746 and Plpp4

DIOPT Version :10

Sequence 1:NP_649551.4 Gene:CG12746 / 40672 FlyBaseID:FBgn0037341 Length:363 Species:Drosophila melanogaster
Sequence 2:XP_063119499.1 Gene:Plpp4 / 309014 RGDID:1306289 Length:274 Species:Rattus norvegicus


Alignment Length:266 Identity:106/266 - (39%)
Similarity:153/266 - (57%) Gaps:37/266 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 AVDVVLRVLLVITFFKLETMTAFKREIHEEELWLYKNPRRPDIVRGGEL---LFWVIVAPFLVTI 133
            |:::.:|.||...|...|.:..|:|.|..||:||||||    :|:...:   |.:.|  .||..:
  Rat     5 AIEIGVRALLFGVFVFTEFLDPFQRVIQPEEIWLYKNP----LVQSDNIPTRLMFAI--SFLTPL 63

  Fly   134 AFYWYTR-----DRRDFRAASWAWTLALCMNGIPTSVLKITVGRPRPDYFYRCFPDGVMVLNTTS 193
            |.....:     |:.:.:.|..|.:|||.:||:.|:.:|:.|||||||:||||||||||  |:  
  Rat    64 AVICVVKIIRRTDKTEIKEAFLAVSLALALNGVCTNTIKLIVGRPRPDFFYRCFPDGVM--NS-- 124

  Fly   194 NGVDTSILDFNCTGLPGDINEGRKSFPSGHSSFAFASFGFIAYYIGAKLHAFDSRGRGHTWRLCI 258
                    :.:|||.|..::||||||||.||||||:..||..:|:..|||.|...|||.:||||.
  Rat   125 --------EMHCTGDPDLVSEGRKSFPSIHSSFAFSGLGFTTFYLAGKLHCFTESGRGKSWRLCA 181

  Fly   259 AVIPLFIALLVAVSRTCDYHHHWQDVTIGGLIGLFAGYISYTQYYPSIFCPDAGIPLVRWPSREG 323
            |::||:.|:::|:||.|||.||||.|.:  .:...|....:.:....:.|||:.:         |
  Rat   182 AILPLYCAMMIALSRMCDYKHHWQAVAV--TVSRRAVPSLHVKEVHQLLCPDSIL---------G 235

  Fly   324 SQYQRL 329
            |..|:|
  Rat   236 SSEQQL 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12746NP_649551.4 PAP2_containing_1_like 104..302 CDD:239484 88/205 (43%)
Plpp4XP_063119499.1 None

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