DRSC/TRiP Functional Genomics Resources

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Protein Alignment LYN and BCK1

DIOPT Version :9

Sequence 1:XP_011515831.1 Gene:LYN / 4067 HGNCID:6735 Length:682 Species:Homo sapiens
Sequence 2:NP_012440.1 Gene:BCK1 / 853350 SGDID:S000003631 Length:1478 Species:Saccharomyces cerevisiae


Alignment Length:728 Identity:168/728 - (23%)
Similarity:263/728 - (36%) Gaps:208/728 - (28%)


- Green bases have known domain annotations that are detailed below.


Human   100 PPSGLNMQIRAP------GSSWDL--SAEPRDSQFLSRRAGPRCRS--LPGRGASGPDALQPPAR 154
            |..|..:.|..|      .||:.:  ..|..:..|..||..|..:.  .|.|.|..|.|...|.|
Yeast   755 PDKGSKLNIPTPITENESKSSFQVLRKDEGTEIDFNHRRESPYTKPELAPKREAPKPPANTSPQR 819

Human   155 G-------------------KRGGRATPGPAP--AAPRRASS------VPGQQPPHTQVLLGRPV 192
            .                   .|..|:.|.|..  ::|..|||      .....|..|.||:.:|.
Yeast   820 TLSTSKQNKPIRLVRASTKISRSKRSKPLPPQLLSSPIEASSSSPDSLTSSYTPASTHVLIPQPY 884

Human   193 ------------------APPTL---------NSS--------HRGAPPPRNFHRERVPESQLLP 222
                              ..|:|         ||:        :..:|..:..:.:||..|.   
Yeast   885 KGANDVMRRLKTDQDSTSTSPSLKMKQKVNRSNSTVSTSNSIFYSPSPLLKRGNSKRVVSST--- 946

Human   223 GQRFQTKDPEEQGDIVVALYP--YDGIHPDDLSF--------------------KKGEKMKVLEE 265
                ...|..|:.||..|..|  :|....||.|.                    ||.||......
Yeast   947 ----SAADIFEENDITFADAPPMFDSDDSDDDSSSSDDIIWSKKKTAPETNNENKKDEKSDNSST 1007

Human   266 HGEW----WKAKSLLTKKEGFIPSNYVAKLNTLETEEWFF------KDITRKDAE-------RQL 313
            |.:.    .:.:..:.:|..|.||..|...|.    |.||      |.||...|.       ..|
Yeast  1008 HSDEIFYDSQTQDKMERKMTFRPSPEVVYQNL----EKFFPRANLDKPITEGIASPTSPKSLDSL 1068

Human   314 LAPGNSAGAFLIRESETLKGSFSLSVRDFDPVHGDVIKHYKIRSLDNGGYYISPRITFPCISDMI 378
            |:|.|      :..|.|...:.|      .||..|....: |:...||......:...|..:..|
Yeast  1069 LSPKN------VASSRTEPSTPS------RPVPPDSSYEF-IQDGLNGKNKPLNQAKTPKRTKTI 1120

Human   379 KHYQKQADGLCRRLEKACISPKPQ--KPWDKDAWEIPRE---SIKLVKR---------------L 423
            :....:| .|.|   |..:..|.|  |.|.....|:...   ||...|.               :
Yeast  1121 RTIAHEA-SLAR---KNSVKLKRQNTKMWGTRMVEVTENHMVSINKAKNSKGEYKEFAWMKGEMI 1181

Human   424 GAGQFGEVWMGYYNNST--KVAVKTLKPGTMS---------VQAFLEEANLMKTLQHDKLVRLYA 477
            |.|.||.|:: ..|.:|  .:|||.::....|         |:|...|.:.:|.|.|..:|:...
Yeast  1182 GKGSFGAVYL-CLNVTTGEMMAVKQVEVPKYSSQNEAILSTVEALRSEVSTLKDLDHLNIVQYLG 1245

Human   478 VVTREEPIYIITEYMAKGSLLDFLKS----DEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDL 538
            ...:.....:..||:|.||:...::.    ||      |.:...:.|:.:|:||:..|..:|||:
Yeast  1246 FENKNNIYSLFLEYVAGGSVGSLIRMYGRFDE------PLIKHLTTQVLKGLAYLHSKGILHRDM 1304

Human   539 RAANVLVSESLMCKIADFGLARVIED---NEYTAREGAKFPIKWTAPEAINF--GCFTIKSDVWS 598
            :|.|:|:.:..:|||:|||::|..:|   |......|..|   |.|||.::.  | ::.|.|:||
Yeast  1305 KADNLLLDQDGICKISDFGISRKSKDIYSNSDMTMRGTVF---WMAPEMVDTKQG-YSAKVDIWS 1365

Human   599 FGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCPDELYDIMKM-----------CWKE 652
            .|.::.|:.. ||.|:   :|.:|:.|:   :::.:.::.|....|.:.:           |::.
Yeast  1366 LGCIVLEMFA-GKRPW---SNLEVVAAM---FKIGKSKSAPPIPEDTLPLISQIGRNFLDACFEI 1423

Human   653 KAEERPTFDYLQS 665
            ..|:|||.:.|.|
Yeast  1424 NPEKRPTANELLS 1436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LYNXP_011515831.1 SH3_Lyn 237..292 CDD:212937 17/80 (21%)
SH2_Src_Lyn 295..395 CDD:198227 25/112 (22%)
PTKc_Lyn 409..680 CDD:270657 78/306 (25%)
Pkinase_Tyr 417..667 CDD:285015 76/295 (26%)
BCK1NP_012440.1 STKc_Bck1_like 1173..1440 CDD:270799 74/282 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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