DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snm1 and DCLRE1A

DIOPT Version :10

Sequence 1:NP_649548.1 Gene:Snm1 / 40669 FlyBaseID:FBgn0037338 Length:763 Species:Drosophila melanogaster
Sequence 2:NP_055696.3 Gene:DCLRE1A / 9937 HGNCID:17660 Length:1040 Species:Homo sapiens


Alignment Length:607 Identity:200/607 - (32%)
Similarity:301/607 - (49%) Gaps:83/607 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IKIRSIADLQATVRVNVEPDPTP-TIENRTPDKKRA-GRTRAASTTKKVRPKTEACPIIASTAFK 69
            :|...:...::.|...:...||. ||...:.:...| ..|.:|...:|.   .|..|:..:|...
Human   461 VKSLMLKPFESQVEGYLSSQPTQNTIRKLSSENLNAKNNTNSACFCRKA---LEGVPVGKATILN 522

  Fly    70 RSS-KKTPLPGQMRIDSFFTSAVK-NYKVKSSSSCRKVD-------PPLDKRKVSTKGRKRLFEE 125
            ..: ..||.|..::|   ..|.:| |.:..|:...:::|       ||  |||          ||
Human   523 TENLSSTPAPKYLKI---LPSGLKYNARHPSTKVMKQMDIGVYFGLPP--KRK----------EE 572

  Fly   126 STTTSSAFTG-KLDAKPS--EKRVQPSRRAKGKENASLSEVHV-----------IDLCSEDEQTI 176
            .....||..| .|:..||  :||   |.:.|.|...|||::..           ::|.||..|..
Human   573 KLLGESALEGINLNPVPSPNQKR---SSQCKRKAEKSLSDLEFDASTLHESQLSVELSSERSQRQ 634

  Fly   177 KRKPSAIASPCEKSSDVQATKFRTPETSMPEAKLSNSSLDLVEI-SPGPNKSPTNNFYRSSPAAI 240
            |::       |.||:.:|            |......|..|:.. |...|.|....|.:|:...:
Human   635 KKR-------CRKSNSLQ------------EGACQKRSDHLINTESEAVNLSKVKVFTKSAHGGL 680

  Fly   241 TK-ESPLGKNSKKGTVRKQRKPKPCPPYKVVEGTSFCVDGFQFGEIEGVTHYFLTHFHADHYIGL 304
            .: ...:.::|..|..||    |.||.||.:.||.|.||.||:|.:||.|.|||||||:|||.||
Human   681 QRGNKKIPESSNVGGSRK----KTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGL 741

  Fly   305 TKKFCHPLYVSPISARLVRTFIKLDETHIHEIDVDQTLDVDGVQVTALEANHCPGALMFFFKLSS 369
            :|.|..|:|.|.|:..|::..:.:.|.:||.:.:|....|:||:|..|:|||||||:|..|.|.:
Human   742 SKHFTFPVYCSEITGNLLKNKLHVQEQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFYLPN 806

  Fly   370 GECILHTGDFRASADMESLPIFWNHSNIDLLYLDTTYMNKNYDFCHQSESVDRAVDLVRAFLEKN 434
            |..|||||||||...||...:  ....:.:|||||||.:..|.|..|.|.:..|::  .||....
Human   807 GTVILHTGDFRADPSMERSLL--ADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAIN--TAFEAVT 867

  Fly   435 AAKRILIVCGSYVIGKEKIWLALAKEFTMRVWTESNRSTAVRCLNWPDLDSVLTEDRSGANLHVI 499
            .....|:|||:|.|||||::||:|.....:|.....:...::|||.|:::|::|.|...:.:|::
Human   868 LNPHALVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEINSLITTDMCSSLVHLL 932

  Fly   500 AMGKISYPSLVDYFTEFEDQYDMLLGIRPSGWEKNSK--------PSYGKRISTIGIEYSEHSSY 556
            .|.:|::..|..:..:...:|:.:|..||:||..::|        |.....||..||.|||||||
Human   933 PMMQINFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFTRIADVIPQTKGNISIYGIPYSEHSSY 997

  Fly   557 KELERFVRFLKPKRVISTVPVG 578
            .|::|||::|||:::|.||.||
Human   998 LEMKRFVQWLKPQKIIPTVNVG 1019

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snm1NP_649548.1 SNM1A-1C-like_MBL-fold 252..408 CDD:293831 76/155 (49%)
DRMBL 481..578 CDD:429512 37/104 (36%)
DCLRE1ANP_055696.3 Nuclear localization region 1..190
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 15..76
Nuclear focus formation 396..614 43/173 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 582..602 8/22 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 623..651 10/46 (22%)
SNM1A-like_MBL-fold 689..844 CDD:293856 77/160 (48%)
DRMBL 914..1019 CDD:429512 37/104 (36%)
Blue background indicates that the domain is not in the aligned region.

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