DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snm1 and AT3G07530

DIOPT Version :10

Sequence 1:NP_649548.1 Gene:Snm1 / 40669 FlyBaseID:FBgn0037338 Length:763 Species:Drosophila melanogaster
Sequence 2:NP_001325705.1 Gene:AT3G07530 / 819942 AraportID:AT3G07530 Length:700 Species:Arabidopsis thaliana


Alignment Length:384 Identity:74/384 - (19%)
Similarity:120/384 - (31%) Gaps:138/384 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   421 DRAVDLVRAFLEKNAAKRILIVCGSYVIGKEKIWLALAKEFTMRVWTESNRSTAVRCLNWPDLDS 485
            |.::|......:|...:|.| .|...|.  |:.|....|  .:.:|..|            .:|.
plant    58 DESLDAQNPIQKKQKLERQL-TCADLVC--EEPWYKTVK--ALHLWEAS------------FIDI 105

  Fly   486 VLTEDRSGANLHVIAMGKISYPSLVD--------YFTE---------FEDQYDMLLGIR----PS 529
            ||..:         .||.:..|.|..        |.||         .||...|....|    |.
plant   106 VLISN---------PMGLLGLPFLTQNPGFFAKIYMTEVTAKIGQLMMEDIVSMHKEFRCFHGPD 161

  Fly   530 -----GWEKN----------SKPSYGK---------RISTI-----------GIEYSEHSSYKEL 559
                 ||.||          .|..:|:         |:.::           |::::|...|   
plant   162 NSSFPGWIKNLDSEQVPALLKKVVFGESGDDLGSWMRLYSLDDIESCMKKVQGVKFAEEVCY--- 223

  Fly   560 ERFVRFLKPKRVISTVPVGRDLYVTGEVPIRWYKYEGRASMLRTGFQPSI-----STFLATPKRA 619
                   ....:|..:..|.|:              |..:.|..|...|:     |.|::...|:
plant   224 -------NGTLIIKALSSGLDI--------------GACNWLINGPNGSLSYVSDSIFVSHHARS 267

  Fly   620 FAKFSADTEMFLSPVDENASKGSEDKKDDDRESVVPTNHV-TIISDTPEECFQTDSKIPVKNEPL 683
            |..........|...|.::.:.:|..:|.........|:: ||.||..:....|:..:. :.|.|
plant   268 FDFHGLKETDVLIYSDFSSLQSAEVTEDGCISPDSDNNYISTISSDNKDSLLNTEDSLE-EMEKL 331

  Fly   684 APDTSPNSE----------------IVAQL-----NAMES---EIP-YVEIDIKNETIA 717
            |...|..:|                ||.||     |::||   ::| :|...:..|.:|
plant   332 AFVCSCAAESADAGGSTLITITRIGIVLQLLELLSNSLESSSLKVPIFVISSVAEELLA 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snm1NP_649548.1 SNM1A-1C-like_MBL-fold 252..408 CDD:293831
DRMBL 481..578 CDD:429512 26/152 (17%)
AT3G07530NP_001325705.1 metallo-hydrolase-like_MBL-fold <101..280 CDD:451500 37/223 (17%)
Beta-Casp 375..479 CDD:214983 4/16 (25%)
Blue background indicates that the domain is not in the aligned region.

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